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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180426689
OBVZ01000248
235146
Actinomycetota
CGT
Thr
>WENV180426882
OBVZ01001060
119475
Actinomycetota
TAA
Leu
>WENV180426826
OBVZ01000757
235347
Actinomycetota
GGC
Ala
>WENV180426827
OBVZ01000757
235347
Actinomycetota
GGC
Ala
>WENV180426713
OBVZ01000308
166493
Actinomycetota
CTT
Lys
>WENV180426800
OBVZ01000587
166750
Actinomycetota
CAT
Met
>WENV180426912
OBVZ01001344
235153
Actinomycetota
CCT
Arg
>WENV180426866
OBVZ01000949
144589
Actinomycetota
ACG
Arg
>WENV180426867
OBVZ01000949
144589
Actinomycetota
ACG
Arg
>WENV180426668
OBVZ01000226
123202
Actinomycetota
ACG
Arg
>WENV180426925
OBVZ01001594
37070
Actinomycetota
CGA
Ser
>WENV180426943
OBVZ01001898
235194
Actinomycetota
GTG
His
>WENV180426806
OBVZ01000648
158720
Actinomycetota
ACG
Arg
>WENV180426807
OBVZ01000648
158720
Actinomycetota
ACG
Arg
>WENV180426615
OBVZ01000149
245301
Actinomycetota
GCC
Gly
>WENV180426946
OBVZ01001976
245301
Actinomycetota
GCC
Gly
>WENV180426948
OBVZ01001976
245301
Actinomycetota
GCC
Gly
>WENV180426915
OBVZ01001473
411601
Actinomycetota
CCC
Gly
>WENV180426854
OBVZ01000856
144826
Actinomycetota
GGG
Pro
>WENV180426655
OBVZ01000211
23370
Actinomycetota
GCT
Ser
>WENV180426796
OBVZ01000569
338239
Actinomycetota
TTC
Glu
>WENV180426744
OBVZ01000366
16219
Actinomycetota
GCT
Ser
>WENV180426900
OBVZ01001162
235174
Actinomycetota
TGC
Ala
>WENV180426705
OBVZ01000265
235101
Actinomycetota
TTT
Lys
>WENV180426794
OBVZ01000558
235101
Actinomycetota
TTT
Lys
>WENV180426641
OBVZ01000199
121510
Actinomycetota
TAA
Leu
>WENV180426973
OBVZ01002751
147732
Actinomycetota
GTC
Asp
>WENV180426974
OBVZ01002751
147732
Actinomycetota
GTC
Asp
>WENV180426917
OBVZ01001532
153948
Actinomycetota
GGG
Pro
>WENV180426855
OBVZ01000860
44855
Actinomycetota
TGA
Ser
>WENV180426895
OBVZ01001126
145345
Actinomycetota
TAC
Val
>WENV180426815
OBVZ01000716
235199
Actinomycetota
CAC
Val
>WENV180426804
OBVZ01000633
44862
Actinomycetota
CGA
Ser
>WENV180426667
OBVZ01000226
338236
Actinomycetota
GAA
Phe
>WENV180426825
OBVZ01000757
413665
Actinomycetota
TTG
Gln
>WENV180426799
OBVZ01000587
254857
Actinomycetota
CCG
Arg
>WENV180426916
OBVZ01001526
16223
Actinomycetota
GAG
Leu
>WENV180426856
OBVZ01000868
144593
Actinomycetota
TAT
Ile
>WENV180426654
OBVZ01000211
144700
Actinomycetota
CAT
Met
>WENV180427042
OBVZ01010929
235388
Actinomycetota
GTG
His
>WENV180426844
OBVZ01000824
144636
Actinomycetota
GAT
Ile
>WENV180426703
OBVZ01000265
243671
Actinomycetota
CTC
Glu
>WENV180426965
OBVZ01002621
243671
Actinomycetota
CTC
Glu
>WENV180426742
OBVZ01000366
98279
Actinomycetota
GTA
Tyr
>WENV180426704
OBVZ01000265
338148
Actinomycetota
CTG
Gln
>WENV180426966
OBVZ01002621
338148
Actinomycetota
CTG
Gln
>WENV180426790
OBVZ01000541
235148
Actinomycetota
GTT
Asn
>WENV180426863
OBVZ01000921
235148
Actinomycetota
GTT
Asn
>WENV180426909
OBVZ01001261
235148
Actinomycetota
GTT
Asn
>WENV180426918
OBVZ01001547
235148
Actinomycetota
GTT
Asn
>WENV180426919
OBVZ01001547
235148
Actinomycetota
GTT
Asn
>WENV180426996
OBVZ01004110
144825
Actinomycetota
CAT
Met
>WENV180426775
OBVZ01000475
338139
Actinomycetota
GTT
Asn
>WENV180426776
OBVZ01000475
338139
Actinomycetota
GTT
Asn
>WENV180426706
OBVZ01000276
235348
Actinomycetota
CCT
Arg
>WENV180426671
OBVZ01000226
37521
Actinomycetota
GCT
Ser
>WENV180426789
OBVZ01000540
411554
Actinomycetota
CCC
Gly
>WENV180426688
OBVZ01000248
113601
Actinomycetota
TAG
Leu
>WENV180426642
OBVZ01000199
144595
Actinomycetota
CAA
Leu
>WENV180426747
OBVZ01000387
144595
Actinomycetota
CAA
Leu
>WENV180426724
OBVZ01000319
145343
Actinomycetota
GGG
Pro
>WENV180426865
OBVZ01000947
235149
Actinomycetota
CCT
Arg
>WENV180426777
OBVZ01000476
414234
Actinomycetota
CTG
Gln
>WENV180426736
OBVZ01000354
153915
Actinomycetota
ACG
Arg
>WENV180426737
OBVZ01000354
153915
Actinomycetota
ACG
Arg
>WENV180426738
OBVZ01000354
153915
Actinomycetota
ACG
Arg
>WENV180426993
OBVZ01003882
163764
Actinomycetota
TGG
Pro
>WENV180426687
OBVZ01000248
235121
Actinomycetota
CGT
Thr
>WENV180426702
OBVZ01000265
47164
Actinomycetota
GGA
Ser
>WENV180426748
OBVZ01000387
144635
Actinomycetota
TGG
Pro
>WENV180426869
OBVZ01000995
80622
Actinomycetota
CAG
Leu
>WENV180426797
OBVZ01000569
147734
Actinomycetota
GTC
Asp
>WENV180426904
OBVZ01001243
147734
Actinomycetota
GTC
Asp
>WENV180426959
OBVZ01002361
44851
Actinomycetota
TGA
Ser
>WENV180426729
OBVZ01000325
16222
Actinomycetota
GAG
Leu
>WENV180426758
OBVZ01000408
158513
Actinomycetota
TGG
Pro
>WENV180426947
OBVZ01001976
412834
Actinomycetota
GCA
Cys
>WENV180426901
OBVZ01001162
235173
Actinomycetota
GGC
Ala
>WENV180426922
OBVZ01001577
235173
Actinomycetota
GGC
Ala
>WENV180426910
OBVZ01001261
243162
Actinomycetota
GTT
Asn
>WENV180426661
OBVZ01000217
144660
Actinomycetota
TAC
Val
>WENV180426672
OBVZ01000226
411599
Actinomycetota
TTG
Gln
>WENV180426653
OBVZ01000211
95593
Actinomycetota
>WENV180426811
OBVZ01000701
144823
Actinomycetota
TCT
Arg
>WENV180426903
OBVZ01001242
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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