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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180440030
OBWU01002012
16842
Bacillota
CGA
Ser
>WENV180440036
OBWU01003272
354367
Bacillota
TTG
Gln
>WENV180440038
OBWU01003272
114359
Bacillota
TAG
Leu
>WENV180440052
OBWU01004319
7010
Bacillota
GGA
Ser
>WENV180440014
OBWU01001467
16834
Bacillota
GCT
Ser
>WENV180440059
OBWU01007930
243612
Bacillota
TAC
Val
>WENV180440029
OBWU01001945
258936
Bacillota
GGT
Thr
>WENV180440034
OBWU01002742
342895
Bacillota
CAT
Met
>WENV180440041
OBWU01003272
150597
Bacillota
TCT
Arg
>WENV180439842
OBWU01000004
146741
Bacillota
CAT
Met
>WENV180440035
OBWU01003272
235905
Bacillota
GTG
His
>WENV180440040
OBWU01003272
411739
Bacillota
TCC
Gly
>WENV180440037
OBWU01003272
237963
Bacillota
TTT
Lys
>WENV180440057
OBWU01007132
353527
Bacillota
TTC
Glu
>WENV180440077
OBWU01014165
413657
Bacillota
CCC
Gly
>WENV180439843
OBWU01000004
163799
Bacillota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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