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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
71 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180445208
OBXA01002346
235146
Actinomycetota
CGT
Thr
>WENV180445738
OBXA01017633
119475
Actinomycetota
TAA
Leu
>WENV180445423
OBXA01004983
235347
Actinomycetota
GGC
Ala
>WENV180445093
OBXA01001404
3239
Actinomycetota
GCT
Ser
>WENV180445812
OBXA01029140
16400
Actinomycetota
GAG
Leu
>WENV180445763
OBXA01020967
37070
Actinomycetota
CGA
Ser
>WENV180445504
OBXA01006645
201717
Actinomycetota
CTT
Lys
>WENV180445541
OBXA01007547
201717
Actinomycetota
CTT
Lys
>WENV180445617
OBXA01010316
144600
Actinomycetota
TGG
Pro
>WENV180445538
OBXA01007510
235194
Actinomycetota
GTG
His
>WENV180445206
OBXA01002346
273786
Actinomycetota
CGT
Thr
>WENV180445201
OBXA01002339
158720
Actinomycetota
ACG
Arg
>WENV180445497
OBXA01006374
245301
Actinomycetota
GCC
Gly
>WENV180445676
OBXA01013484
245301
Actinomycetota
GCC
Gly
>WENV180445416
OBXA01004843
411601
Actinomycetota
CCC
Gly
>WENV180445387
OBXA01004272
23370
Actinomycetota
GCT
Ser
>WENV180445157
OBXA01001917
174149
Actinomycetota
GAT
Ile
>WENV180445537
OBXA01007448
338239
Actinomycetota
TTC
Glu
>WENV180445709
OBXA01015591
338239
Actinomycetota
TTC
Glu
>WENV180445158
OBXA01001917
235174
Actinomycetota
TGC
Ala
>WENV180445405
OBXA01004604
121510
Actinomycetota
TAA
Leu
>WENV180445950
OBXA01054463
356045
Actinomycetota
GAC
Val
>WENV180445861
OBXA01032946
153948
Actinomycetota
GGG
Pro
>WENV180445510
OBXA01006711
44855
Actinomycetota
TGA
Ser
>WENV180445585
OBXA01009063
145345
Actinomycetota
TAC
Val
>WENV180445951
OBXA01054463
235199
Actinomycetota
CAC
Val
>WENV180445335
OBXA01003622
44862
Actinomycetota
CGA
Ser
>WENV180445710
OBXA01015631
198659
Actinomycetota
TAC
Val
>WENV180445402
OBXA01004539
413665
Actinomycetota
TTG
Gln
>WENV180445240
OBXA01002679
254857
Actinomycetota
CCG
Arg
>WENV180445835
OBXA01030825
16223
Actinomycetota
GAG
Leu
>WENV180445764
OBXA01021086
144593
Actinomycetota
TAT
Ile
>WENV180445228
OBXA01002641
144700
Actinomycetota
CAT
Met
>WENV180445690
OBXA01014303
144636
Actinomycetota
GAT
Ile
>WENV180445863
OBXA01033633
45147
Actinomycetota
CGA
Ser
>WENV180445394
OBXA01004461
295695
Actinomycetota
CTC
Glu
>WENV180445577
OBXA01008675
295695
Actinomycetota
CTC
Glu
>WENV180445395
OBXA01004461
338148
Actinomycetota
CTG
Gln
>WENV180445578
OBXA01008675
338148
Actinomycetota
CTG
Gln
>WENV180445745
OBXA01018664
235148
Actinomycetota
GTT
Asn
>WENV180445238
OBXA01002664
53078
Actinomycetota
GGA
Ser
>WENV180445722
OBXA01016635
237792
Actinomycetota
CCT
Arg
>WENV180445094
OBXA01001404
338238
Actinomycetota
CCA
Trp
>WENV180445604
OBXA01009748
113702
Actinomycetota
TAA
Leu
>WENV180445752
OBXA01019955
176456
Actinomycetota
TCT
Arg
>WENV180445105
OBXA01001469
144825
Actinomycetota
CAT
Met
>WENV180445524
OBXA01007029
338139
Actinomycetota
GTT
Asn
>WENV180445159
OBXA01001918
235348
Actinomycetota
CCT
Arg
>WENV180445219
OBXA01002522
37521
Actinomycetota
GCT
Ser
>WENV180445708
OBXA01015561
237794
Actinomycetota
CCG
Arg
>WENV180445748
OBXA01019365
411554
Actinomycetota
CCC
Gly
>WENV180445207
OBXA01002346
113601
Actinomycetota
TAG
Leu
>WENV180445225
OBXA01002600
144595
Actinomycetota
CAA
Leu
>WENV180445422
OBXA01004963
144595
Actinomycetota
CAA
Leu
>WENV180445866
OBXA01035370
235149
Actinomycetota
CCT
Arg
>WENV180445758
OBXA01020232
51286
Actinomycetota
TGA
Ser
>WENV180445543
OBXA01007678
414234
Actinomycetota
CTG
Gln
>WENV180445586
OBXA01009117
144635
Actinomycetota
TGG
Pro
>WENV180445489
OBXA01006176
61501
Actinomycetota
CAG
Leu
>WENV180445278
OBXA01002928
80622
Actinomycetota
CAG
Leu
>WENV180445849
OBXA01032011
44851
Actinomycetota
TGA
Ser
>WENV180445459
OBXA01005618
16222
Actinomycetota
GAG
Leu
>WENV180445314
OBXA01003450
158513
Actinomycetota
TGG
Pro
>WENV180445800
OBXA01027548
163948
Actinomycetota
CAT
Met
>WENV180445876
OBXA01036333
235173
Actinomycetota
GGC
Ala
>WENV180445753
OBXA01020015
243162
Actinomycetota
GTT
Asn
>WENV180445292
OBXA01003074
144660
Actinomycetota
TAC
Val
>WENV180445875
OBXA01036333
267574
Actinomycetota
CAC
Val
>WENV180445227
OBXA01002641
95593
Actinomycetota
>WENV180445625
OBXA01010883
95593
Actinomycetota
>WENV180445566
OBXA01008377
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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