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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
84 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180455245
OBXO01000668
235146
Actinomycetota
CGT
Thr
>WENV180454888
OBXO01000113
235347
Actinomycetota
GGC
Ala
>WENV180454889
OBXO01000113
235347
Actinomycetota
GGC
Ala
>WENV180454988
OBXO01000217
166493
Actinomycetota
CTT
Lys
>WENV180455060
OBXO01000330
166493
Actinomycetota
CTT
Lys
>WENV180455566
OBXO01010766
166493
Actinomycetota
CTT
Lys
>WENV180455431
OBXO01003505
144589
Actinomycetota
ACG
Arg
>WENV180455241
OBXO01000654
16400
Actinomycetota
GAG
Leu
>WENV180454890
OBXO01000113
144600
Actinomycetota
TGG
Pro
>WENV180454865
OBXO01000093
235194
Actinomycetota
GTG
His
>WENV180455243
OBXO01000668
273786
Actinomycetota
CGT
Thr
>WENV180454891
OBXO01000113
158720
Actinomycetota
ACG
Arg
>WENV180454892
OBXO01000113
158720
Actinomycetota
ACG
Arg
>WENV180455289
OBXO01001017
158720
Actinomycetota
ACG
Arg
>WENV180455111
OBXO01000398
411601
Actinomycetota
CCC
Gly
>WENV180455037
OBXO01000310
144826
Actinomycetota
GGG
Pro
>WENV180455049
OBXO01000326
144826
Actinomycetota
GGG
Pro
>WENV180455013
OBXO01000238
23370
Actinomycetota
GCT
Ser
>WENV180454937
OBXO01000158
174149
Actinomycetota
GAT
Ile
>WENV180454832
OBXO01000069
338239
Actinomycetota
TTC
Glu
>WENV180455222
OBXO01000570
338239
Actinomycetota
TTC
Glu
>WENV180455174
OBXO01000484
16219
Actinomycetota
GCT
Ser
>WENV180454936
OBXO01000156
235174
Actinomycetota
TGC
Ala
>WENV180454938
OBXO01000158
235174
Actinomycetota
TGC
Ala
>WENV180454998
OBXO01000227
235101
Actinomycetota
TTT
Lys
>WENV180454996
OBXO01000223
235101
Actinomycetota
TTT
Lys
>WENV180455034
OBXO01000299
121510
Actinomycetota
TAA
Leu
>WENV180455113
OBXO01000399
356045
Actinomycetota
GAC
Val
>WENV180455149
OBXO01000440
356045
Actinomycetota
GAC
Val
>WENV180455351
OBXO01001802
235848
Actinomycetota
TTT
Lys
>WENV180455382
OBXO01002323
145423
Actinomycetota
TCT
Arg
>WENV180455167
OBXO01000460
44855
Actinomycetota
TGA
Ser
>WENV180454857
OBXO01000084
145345
Actinomycetota
TAC
Val
>WENV180455114
OBXO01000399
235199
Actinomycetota
CAC
Val
>WENV180455150
OBXO01000440
235199
Actinomycetota
CAC
Val
>WENV180455311
OBXO01001202
44862
Actinomycetota
CGA
Ser
>WENV180455776
OBXO01044460
239204
Actinomycetota
CTT
Lys
>WENV180454887
OBXO01000113
413665
Actinomycetota
TTG
Gln
>WENV180455152
OBXO01000441
413665
Actinomycetota
TTG
Gln
>WENV180455442
OBXO01003858
45154
Actinomycetota
TGA
Ser
>WENV180455385
OBXO01002459
254857
Actinomycetota
CCG
Arg
>WENV180455022
OBXO01000252
113703
Actinomycetota
TAG
Leu
>WENV180455012
OBXO01000238
144700
Actinomycetota
CAT
Met
>WENV180454929
OBXO01000148
243671
Actinomycetota
CTC
Glu
>WENV180454994
OBXO01000223
243671
Actinomycetota
CTC
Glu
>WENV180455268
OBXO01000826
45147
Actinomycetota
CGA
Ser
>WENV180455352
OBXO01001826
98279
Actinomycetota
GTA
Tyr
>WENV180454930
OBXO01000148
338148
Actinomycetota
CTG
Gln
>WENV180454995
OBXO01000223
338148
Actinomycetota
CTG
Gln
>WENV180454931
OBXO01000152
235148
Actinomycetota
GTT
Asn
>WENV180454932
OBXO01000152
235148
Actinomycetota
GTT
Asn
>WENV180454934
OBXO01000154
237792
Actinomycetota
CCT
Arg
>WENV180455310
OBXO01001187
113702
Actinomycetota
TAA
Leu
>WENV180454918
OBXO01000138
144825
Actinomycetota
CAT
Met
>WENV180454919
OBXO01000138
235348
Actinomycetota
CCT
Arg
>WENV180455170
OBXO01000476
237794
Actinomycetota
CCG
Arg
>WENV180455036
OBXO01000301
411554
Actinomycetota
CCC
Gly
>WENV180455344
OBXO01001616
411554
Actinomycetota
CCC
Gly
>WENV180455244
OBXO01000668
113601
Actinomycetota
TAG
Leu
>WENV180455019
OBXO01000250
144595
Actinomycetota
CAA
Leu
>WENV180455035
OBXO01000299
144595
Actinomycetota
CAA
Leu
>WENV180455419
OBXO01002991
152215
Actinomycetota
CAT
Met
>WENV180455358
OBXO01002060
235149
Actinomycetota
CCT
Arg
>WENV180455322
OBXO01001335
145269
Actinomycetota
CAT
Met
>WENV180455021
OBXO01000252
235121
Actinomycetota
CGT
Thr
>WENV180454928
OBXO01000148
47164
Actinomycetota
GGA
Ser
>WENV180454997
OBXO01000223
47164
Actinomycetota
GGA
Ser
>WENV180455357
OBXO01002059
47164
Actinomycetota
GGA
Ser
>WENV180455450
OBXO01004285
144635
Actinomycetota
TGG
Pro
>WENV180455571
OBXO01010848
236216
Actinomycetota
GGC
Ala
>WENV180455110
OBXO01000398
80622
Actinomycetota
CAG
Leu
>WENV180455108
OBXO01000391
16222
Actinomycetota
GAG
Leu
>WENV180454835
OBXO01000069
163948
Actinomycetota
CAT
Met
>WENV180455153
OBXO01000441
235173
Actinomycetota
GGC
Ala
>WENV180455269
OBXO01000847
235173
Actinomycetota
GGC
Ala
>WENV180455421
OBXO01003097
235173
Actinomycetota
GGC
Ala
>WENV180454844
OBXO01000074
243162
Actinomycetota
GTT
Asn
>WENV180454933
OBXO01000152
243162
Actinomycetota
GTT
Asn
>WENV180454981
OBXO01000214
144660
Actinomycetota
TAC
Val
>WENV180454842
OBXO01000074
267574
Actinomycetota
CAC
Val
>WENV180455011
OBXO01000238
95593
Actinomycetota
>WENV180455176
OBXO01000492
95593
Actinomycetota
>WENV180455032
OBXO01000295
144823
Actinomycetota
TCT
Arg
>WENV180455267
OBXO01000813
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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