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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180467804
OBYJ01000024
235146
Actinomycetota
CGT
Thr
>WENV180468484
OBYJ01037179
235347
Actinomycetota
GGC
Ala
>WENV180468069
OBYJ01000329
3239
Actinomycetota
GCT
Ser
>WENV180468102
OBYJ01000428
201717
Actinomycetota
CTT
Lys
>WENV180468488
OBYJ01041522
144600
Actinomycetota
TGG
Pro
>WENV180468176
OBYJ01000775
235194
Actinomycetota
GTG
His
>WENV180468046
OBYJ01000239
158720
Actinomycetota
ACG
Arg
>WENV180468047
OBYJ01000239
158720
Actinomycetota
ACG
Arg
>WENV180468161
OBYJ01000693
411601
Actinomycetota
CCC
Gly
>WENV180468083
OBYJ01000355
144826
Actinomycetota
GGG
Pro
>WENV180467906
OBYJ01000097
23370
Actinomycetota
GCT
Ser
>WENV180467925
OBYJ01000113
174149
Actinomycetota
GAT
Ile
>WENV180468022
OBYJ01000219
338239
Actinomycetota
TTC
Glu
>WENV180467926
OBYJ01000113
235174
Actinomycetota
TGC
Ala
>WENV180468101
OBYJ01000428
235101
Actinomycetota
TTT
Lys
>WENV180468232
OBYJ01001326
121510
Actinomycetota
TAA
Leu
>WENV180467808
OBYJ01000024
356045
Actinomycetota
GAC
Val
>WENV180467895
OBYJ01000095
356045
Actinomycetota
GAC
Val
>WENV180468348
OBYJ01007835
145345
Actinomycetota
TAC
Val
>WENV180467809
OBYJ01000024
235199
Actinomycetota
CAC
Val
>WENV180467896
OBYJ01000095
235199
Actinomycetota
CAC
Val
>WENV180467907
OBYJ01000097
44862
Actinomycetota
CGA
Ser
>WENV180467802
OBYJ01000024
313386
Actinomycetota
CGT
Thr
>WENV180468311
OBYJ01004046
367535
Actinomycetota
CTG
Gln
>WENV180468139
OBYJ01000616
413665
Actinomycetota
TTG
Gln
>WENV180467909
OBYJ01000098
45154
Actinomycetota
TGA
Ser
>WENV180467806
OBYJ01000024
254857
Actinomycetota
CCG
Arg
>WENV180467905
OBYJ01000097
144700
Actinomycetota
CAT
Met
>WENV180468310
OBYJ01004046
295695
Actinomycetota
CTC
Glu
>WENV180467891
OBYJ01000095
235148
Actinomycetota
GTT
Asn
>WENV180467892
OBYJ01000095
235148
Actinomycetota
GTT
Asn
>WENV180468088
OBYJ01000363
235148
Actinomycetota
GTT
Asn
>WENV180468084
OBYJ01000358
53078
Actinomycetota
GGA
Ser
>WENV180468108
OBYJ01000455
53078
Actinomycetota
GGA
Ser
>WENV180468346
OBYJ01006881
53078
Actinomycetota
GGA
Ser
>WENV180468070
OBYJ01000329
338238
Actinomycetota
CCA
Trp
>WENV180468202
OBYJ01000985
144825
Actinomycetota
CAT
Met
>WENV180467942
OBYJ01000123
235348
Actinomycetota
CCT
Arg
>WENV180467803
OBYJ01000024
113601
Actinomycetota
TAG
Leu
>WENV180467975
OBYJ01000160
144595
Actinomycetota
CAA
Leu
>WENV180468301
OBYJ01003002
152547
Actinomycetota
TGG
Pro
>WENV180468189
OBYJ01000871
163764
Actinomycetota
TGG
Pro
>WENV180468081
OBYJ01000347
17009
Actinomycetota
GAG
Leu
>WENV180468110
OBYJ01000463
80622
Actinomycetota
CAG
Leu
>WENV180468440
OBYJ01018211
243162
Actinomycetota
GTT
Asn
>WENV180467865
OBYJ01000066
144660
Actinomycetota
TAC
Val
>WENV180467904
OBYJ01000097
95593
Actinomycetota
>WENV180467880
OBYJ01000079
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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