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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
88 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180499282
OCAH01000679
235146
Actinomycetota
CGT
Thr
>WENV180499113
OCAH01000065
119475
Actinomycetota
TAA
Leu
>WENV180499328
OCAH01001234
235347
Actinomycetota
GGC
Ala
>WENV180499329
OCAH01001234
235347
Actinomycetota
GGC
Ala
>WENV180499258
OCAH01000445
144589
Actinomycetota
ACG
Arg
>WENV180499259
OCAH01000445
144589
Actinomycetota
ACG
Arg
>WENV180499234
OCAH01000319
16400
Actinomycetota
GAG
Leu
>WENV180499218
OCAH01000269
37070
Actinomycetota
CGA
Ser
>WENV180499165
OCAH01000149
201717
Actinomycetota
CTT
Lys
>WENV180499330
OCAH01001243
201717
Actinomycetota
CTT
Lys
>WENV180499304
OCAH01000935
144600
Actinomycetota
TGG
Pro
>WENV180499296
OCAH01000851
235092
Actinomycetota
CCG
Arg
>WENV180499178
OCAH01000173
158720
Actinomycetota
ACG
Arg
>WENV180499408
OCAH01008906
158720
Actinomycetota
ACG
Arg
>WENV180499371
OCAH01002217
245301
Actinomycetota
GCC
Gly
>WENV180499339
OCAH01001346
411601
Actinomycetota
CCC
Gly
>WENV180499381
OCAH01002833
144826
Actinomycetota
GGG
Pro
>WENV180499353
OCAH01001643
23370
Actinomycetota
GCT
Ser
>WENV180499179
OCAH01000173
147146
Actinomycetota
ACG
Arg
>WENV180499359
OCAH01001702
338239
Actinomycetota
TTC
Glu
>WENV180499094
OCAH01000044
16219
Actinomycetota
GCT
Ser
>WENV180499109
OCAH01000061
235174
Actinomycetota
TGC
Ala
>WENV180499127
OCAH01000078
235174
Actinomycetota
TGC
Ala
>WENV180499361
OCAH01001798
235174
Actinomycetota
TGC
Ala
>WENV180499199
OCAH01000214
235101
Actinomycetota
TTT
Lys
>WENV180499288
OCAH01000799
121510
Actinomycetota
TAA
Leu
>WENV180499244
OCAH01000361
144625
Actinomycetota
GTC
Asp
>WENV180499267
OCAH01000501
144625
Actinomycetota
GTC
Asp
>WENV180499297
OCAH01000861
44855
Actinomycetota
TGA
Ser
>WENV180499185
OCAH01000184
145345
Actinomycetota
TAC
Val
>WENV180499271
OCAH01000545
235199
Actinomycetota
CAC
Val
>WENV180499374
OCAH01002236
235199
Actinomycetota
CAC
Val
>WENV180499276
OCAH01000597
44862
Actinomycetota
CGA
Ser
>WENV180499163
OCAH01000147
413665
Actinomycetota
TTG
Gln
>WENV180499291
OCAH01000814
254857
Actinomycetota
CCG
Arg
>WENV180499222
OCAH01000283
144593
Actinomycetota
TAT
Ile
>WENV180499343
OCAH01001444
113703
Actinomycetota
TAG
Leu
>WENV180499225
OCAH01000298
144636
Actinomycetota
GAT
Ile
>WENV180499174
OCAH01000160
45147
Actinomycetota
CGA
Ser
>WENV180499364
OCAH01001818
295695
Actinomycetota
CTC
Glu
>WENV180499092
OCAH01000044
98279
Actinomycetota
GTA
Tyr
>WENV180499197
OCAH01000204
235148
Actinomycetota
GTT
Asn
>WENV180499228
OCAH01000312
235148
Actinomycetota
GTT
Asn
>WENV180499319
OCAH01001138
235148
Actinomycetota
GTT
Asn
>WENV180499320
OCAH01001138
235148
Actinomycetota
GTT
Asn
>WENV180499321
OCAH01001138
235148
Actinomycetota
GTT
Asn
>WENV180499176
OCAH01000168
53078
Actinomycetota
GGA
Ser
>WENV180499284
OCAH01000713
53078
Actinomycetota
GGA
Ser
>WENV180499322
OCAH01001148
237792
Actinomycetota
CCT
Arg
>WENV180499290
OCAH01000807
113702
Actinomycetota
TAA
Leu
>WENV180499237
OCAH01000320
176456
Actinomycetota
TCT
Arg
>WENV180499352
OCAH01001595
144825
Actinomycetota
CAT
Met
>WENV180499177
OCAH01000170
235348
Actinomycetota
CCT
Arg
>WENV180499184
OCAH01000180
237794
Actinomycetota
CCG
Arg
>WENV180499187
OCAH01000194
411554
Actinomycetota
CCC
Gly
>WENV180499238
OCAH01000337
411554
Actinomycetota
CCC
Gly
>WENV180499261
OCAH01000449
113601
Actinomycetota
TAG
Leu
>WENV180499220
OCAH01000280
144595
Actinomycetota
CAA
Leu
>WENV180499313
OCAH01001060
144595
Actinomycetota
CAA
Leu
>WENV180499137
OCAH01000089
145343
Actinomycetota
GGG
Pro
>WENV180499287
OCAH01000783
235149
Actinomycetota
CCT
Arg
>WENV180499249
OCAH01000384
51286
Actinomycetota
TGA
Ser
>WENV180499325
OCAH01001223
414234
Actinomycetota
CTG
Gln
>WENV180499264
OCAH01000485
153915
Actinomycetota
ACG
Arg
>WENV180499265
OCAH01000485
153915
Actinomycetota
ACG
Arg
>WENV180499219
OCAH01000276
91808
Actinomycetota
CAG
Leu
>WENV180499260
OCAH01000449
235121
Actinomycetota
CGT
Thr
>WENV180499384
OCAH01003020
235121
Actinomycetota
CGT
Thr
>WENV180499243
OCAH01000361
393408
Actinomycetota
TTC
Glu
>WENV180499221
OCAH01000280
144635
Actinomycetota
TGG
Pro
>WENV180499224
OCAH01000290
80622
Actinomycetota
CAG
Leu
>WENV180499368
OCAH01001999
80622
Actinomycetota
CAG
Leu
>WENV180499370
OCAH01002204
44851
Actinomycetota
TGA
Ser
>WENV180499331
OCAH01001246
163948
Actinomycetota
CAT
Met
>WENV180499372
OCAH01002217
412834
Actinomycetota
GCA
Cys
>WENV180499110
OCAH01000061
235173
Actinomycetota
GGC
Ala
>WENV180499164
OCAH01000147
235173
Actinomycetota
GGC
Ala
>WENV180499196
OCAH01000204
235173
Actinomycetota
GGC
Ala
>WENV180499216
OCAH01000247
235173
Actinomycetota
GGC
Ala
>WENV180499180
OCAH01000175
243162
Actinomycetota
GTT
Asn
>WENV180499307
OCAH01000985
144660
Actinomycetota
TAC
Val
>WENV180499299
OCAH01000884
278447
Actinomycetota
GTG
His
>WENV180499204
OCAH01000227
267574
Actinomycetota
CAC
Val
>WENV180499215
OCAH01000247
267574
Actinomycetota
CAC
Val
>WENV180499240
OCAH01000354
95593
Actinomycetota
>WENV180499350
OCAH01001558
95593
Actinomycetota
>WENV180499202
OCAH01000222
144823
Actinomycetota
TCT
Arg
>WENV180499256
OCAH01000431
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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