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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180564478
OCLE01000012
147158
Actinomycetota
TTT
Lys
>WENV180564527
OCLE01000071
121519
Actinomycetota
TTG
Gln
>WENV180564475
OCLE01000012
147155
Actinomycetota
GTC
Asp
>WENV180564471
OCLE01000011
237816
Actinomycetota
GGT
Thr
>WENV180564544
OCLE01000084
304559
Actinomycetota
GCC
Gly
>WENV180564462
OCLE01000009
37209
Actinomycetota
GAG
Leu
>WENV180564452
OCLE01000005
147157
Actinomycetota
TAC
Val
>WENV180564466
OCLE01000010
80900
Actinomycetota
TGA
Ser
>WENV180564546
OCLE01000084
339641
Actinomycetota
GAC
Val
>WENV180564477
OCLE01000012
428901
Actinomycetota
CCC
Gly
>WENV180564447
OCLE01000005
339640
Actinomycetota
CTG
Gln
>WENV180564468
OCLE01000010
289966
Actinomycetota
ACG
Arg
>WENV180564547
OCLE01000086
237815
Actinomycetota
CTT
Lys
>WENV180564458
OCLE01000007
237808
Actinomycetota
TGC
Ala
>WENV180564464
OCLE01000010
80899
Actinomycetota
CAG
Leu
>WENV180564476
OCLE01000012
147156
Actinomycetota
GAA
Phe
>WENV180564482
OCLE01000014
237804
Actinomycetota
TGT
Thr
>WENV180564472
OCLE01000011
338489
Actinomycetota
CAT
Met
>WENV180564511
OCLE01000062
237803
Actinomycetota
CGT
Thr
>WENV180564448
OCLE01000005
237812
Actinomycetota
CTC
Glu
>WENV180564469
OCLE01000010
45149
Actinomycetota
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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