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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180568899
OCLO01000530
147158
Actinomycetota
TTT
Lys
>WENV180568884
OCLO01000289
121519
Actinomycetota
TTG
Gln
>WENV180568882
OCLO01000285
147155
Actinomycetota
GTC
Asp
>WENV180568875
OCLO01000194
237816
Actinomycetota
GGT
Thr
>WENV180568907
OCLO01001461
37209
Actinomycetota
GAG
Leu
>WENV180568871
OCLO01000166
147157
Actinomycetota
TAC
Val
>WENV180568893
OCLO01000401
80900
Actinomycetota
TGA
Ser
>WENV180568869
OCLO01000146
415620
Actinomycetota
TCC
Gly
>WENV180568889
OCLO01000346
428901
Actinomycetota
CCC
Gly
>WENV180568906
OCLO01001455
339640
Actinomycetota
CTG
Gln
>WENV180568909
OCLO01002074
289966
Actinomycetota
ACG
Arg
>WENV180568879
OCLO01000239
237815
Actinomycetota
CTT
Lys
>WENV180568872
OCLO01000169
237808
Actinomycetota
TGC
Ala
>WENV180568895
OCLO01000426
80899
Actinomycetota
CAG
Leu
>WENV180568883
OCLO01000285
147156
Actinomycetota
GAA
Phe
>WENV180568886
OCLO01000307
237804
Actinomycetota
TGT
Thr
>WENV180568876
OCLO01000194
338489
Actinomycetota
CAT
Met
>WENV180568867
OCLO01000138
237803
Actinomycetota
CGT
Thr
>WENV180568888
OCLO01000318
45149
Actinomycetota
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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