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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180588218
OCOP01008982
113700
Alphaproteobacteria
>WENV180588467
OCOP01064725
176908
Alphaproteobacteria
GTC
Asp
>WENV180588405
OCOP01047790
148353
Alphaproteobacteria
CAT
Met
>WENV180588608
OCOP01116354
95916
Alphaproteobacteria
TAG
Leu
>WENV180588524
OCOP01083061
307050
Alphaproteobacteria
GGC
Ala
>WENV180588203
OCOP01007394
175748
Alphaproteobacteria
CAT
Met
>WENV180588406
OCOP01048950
341164
Alphaproteobacteria
GCC
Gly
>WENV180588361
OCOP01036823
338760
Alphaproteobacteria
GAA
Phe
>WENV180588356
OCOP01035231
412424
Alphaproteobacteria
TCC
Gly
>WENV180588675
OCOP01147826
388882
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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