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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180736242
ODHB01012575
256200
Betaproteobacteria
CGT
Thr
>WENV180736082
ODHB01004535
155690
Betaproteobacteria
TCT
Arg
>WENV180736175
ODHB01008265
97609
Betaproteobacteria
CAA
Leu
>WENV180736484
ODHB01092681
58732
Betaproteobacteria
CAG
Leu
>WENV180736064
ODHB01004195
62536
Betaproteobacteria
CAG
Leu
>WENV180736030
ODHB01003325
412095
Betaproteobacteria
GCA
Cys
>WENV180735765
ODHB01000588
235250
Betaproteobacteria
>WENV180735766
ODHB01000588
235250
Betaproteobacteria
>WENV180736500
ODHB01116016
235250
Betaproteobacteria
>WENV180736517
ODHB01140787
235250
Betaproteobacteria
>WENV180736208
ODHB01009819
149294
Betaproteobacteria
TCT
Arg
>WENV180736281
ODHB01018125
240188
Betaproteobacteria
GAA
Phe
>WENV180736037
ODHB01003504
155338
Betaproteobacteria
>WENV180736038
ODHB01003504
155338
Betaproteobacteria
>WENV180736039
ODHB01003504
155338
Betaproteobacteria
>WENV180735949
ODHB01002222
352197
Betaproteobacteria
GGT
Thr
>WENV180736431
ODHB01051995
16424
Betaproteobacteria
GGA
Ser
>WENV180735779
ODHB01000650
358597
Betaproteobacteria
CCT
Arg
>WENV180735767
ODHB01000592
238786
Betaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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