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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
130 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180757581
ODHW01000710
243647
Bacillota
TTT
Lys
>WENV180758344
ODHW01021747
243647
Bacillota
TTT
Lys
>WENV180758419
ODHW01038534
243647
Bacillota
TTT
Lys
>WENV180758507
ODHW01065105
243647
Bacillota
TTT
Lys
>WENV180757387
ODHW01000292
16842
Bacillota
CGA
Ser
>WENV180758247
ODHW01012120
16842
Bacillota
CGA
Ser
>WENV180758345
ODHW01022370
37213
Bacillota
TGA
Ser
>WENV180757457
ODHW01000419
342730
Bacillota
CTC
Glu
>WENV180757458
ODHW01000419
342730
Bacillota
CTC
Glu
>WENV180758336
ODHW01021414
267649
Bacillota
TAC
Val
>WENV180758401
ODHW01033434
267649
Bacillota
TAC
Val
>WENV180758412
ODHW01036597
267649
Bacillota
TAC
Val
>WENV180758429
ODHW01040240
267649
Bacillota
TAC
Val
>WENV180757235
ODHW01000130
246392
Bacillota
GTT
Asn
>WENV180758276
ODHW01014447
338152
Bacillota
TTC
Glu
>WENV180757368
ODHW01000273
37549
Bacillota
TAA
Leu
>WENV180757370
ODHW01000274
148348
Bacillota
GTC
Asp
>WENV180758086
ODHW01006036
148348
Bacillota
GTC
Asp
>WENV180758064
ODHW01005585
243099
Bacillota
GTT
Asn
>WENV180758081
ODHW01006036
243099
Bacillota
GTT
Asn
>WENV180758243
ODHW01011982
389888
Bacillota
GCC
Gly
>WENV180757452
ODHW01000411
307003
Bacillota
TGC
Ala
>WENV180758259
ODHW01013245
307003
Bacillota
TGC
Ala
>WENV180758296
ODHW01015688
307003
Bacillota
TGC
Ala
>WENV180757241
ODHW01000132
243119
Bacillota
CTT
Lys
>WENV180758146
ODHW01007903
235150
Bacillota
TGC
Ala
>WENV180758360
ODHW01023361
235150
Bacillota
TGC
Ala
>WENV180757451
ODHW01000406
152047
Bacillota
GGG
Pro
>WENV180758438
ODHW01041767
235137
Bacillota
TGC
Ala
>WENV180758241
ODHW01011982
308424
Bacillota
TTT
Lys
>WENV180757495
ODHW01000502
391536
Bacillota
TTC
Glu
>WENV180757864
ODHW01002691
391536
Bacillota
TTC
Glu
>WENV180758171
ODHW01008742
391536
Bacillota
TTC
Glu
>WENV180758420
ODHW01038534
391536
Bacillota
TTC
Glu
>WENV180758440
ODHW01042313
391536
Bacillota
TTC
Glu
>WENV180757237
ODHW01000130
241761
Bacillota
TAC
Val
>WENV180757271
ODHW01000160
241761
Bacillota
TAC
Val
>WENV180758085
ODHW01006036
241761
Bacillota
TAC
Val
>WENV180758043
ODHW01004996
16834
Bacillota
GCT
Ser
>WENV180758099
ODHW01006232
16834
Bacillota
GCT
Ser
>WENV180757580
ODHW01000710
243646
Bacillota
GTT
Asn
>WENV180757945
ODHW01003431
243646
Bacillota
GTT
Asn
>WENV180757276
ODHW01000165
114002
Bacillota
CAA
Leu
>WENV180758182
ODHW01009307
114002
Bacillota
CAA
Leu
>WENV180757223
ODHW01000117
342736
Bacillota
TTG
Gln
>WENV180757311
ODHW01000206
37437
Bacillota
TAA
Leu
>WENV180757267
ODHW01000160
296878
Bacillota
GTT
Asn
>WENV180757494
ODHW01000502
296878
Bacillota
GTT
Asn
>WENV180758501
ODHW01064685
296878
Bacillota
GTT
Asn
>WENV180758245
ODHW01011982
162028
Bacillota
ACG
Arg
>WENV180757327
ODHW01000221
113951
Bacillota
GTA
Tyr
>WENV180757496
ODHW01000502
243612
Bacillota
TAC
Val
>WENV180757865
ODHW01002691
243612
Bacillota
TAC
Val
>WENV180758172
ODHW01008742
243612
Bacillota
TAC
Val
>WENV180758421
ODHW01038534
243612
Bacillota
TAC
Val
>WENV180758441
ODHW01042313
243612
Bacillota
TAC
Val
>WENV180758395
ODHW01032023
316443
Bacillota
GTC
Asp
>WENV180757321
ODHW01000212
199366
Bacillota
CAT
Met
>WENV180758000
ODHW01004130
199366
Bacillota
CAT
Met
>WENV180758406
ODHW01033880
37269
Bacillota
TGA
Ser
>WENV180758054
ODHW01005398
155089
Bacillota
CAT
Met
>WENV180757399
ODHW01000319
37551
Bacillota
CGA
Ser
>WENV180757251
ODHW01000141
341796
Bacillota
CCG
Arg
>WENV180757371
ODHW01000274
286137
Bacillota
GAA
Phe
>WENV180758087
ODHW01006036
286137
Bacillota
GAA
Phe
>WENV180757320
ODHW01000212
81373
Bacillota
GTA
Tyr
>WENV180757999
ODHW01004130
81373
Bacillota
GTA
Tyr
>WENV180758204
ODHW01010652
81373
Bacillota
GTA
Tyr
>WENV180757467
ODHW01000442
147135
Bacillota
ACG
Arg
>WENV180758476
ODHW01053355
144599
Bacillota
GTC
Asp
>WENV180757817
ODHW01002194
148268
Bacillota
CGG
Pro
>WENV180758467
ODHW01049562
242848
Bacillota
GAA
Phe
>WENV180757304
ODHW01000185
342895
Bacillota
CAT
Met
>WENV180757308
ODHW01000197
342895
Bacillota
CAT
Met
>WENV180757367
ODHW01000273
419945
Bacillota
GCA
Cys
>WENV180757088
ODHW01000026
194150
Bacillota
TGG
Pro
>WENV180757384
ODHW01000292
194150
Bacillota
TGG
Pro
>WENV180757234
ODHW01000129
185292
Bacillota
ACG
Arg
>WENV180757400
ODHW01000320
250349
Bacillota
GAA
Phe
>WENV180757440
ODHW01000380
250349
Bacillota
GAA
Phe
>WENV180757472
ODHW01000463
250349
Bacillota
GAA
Phe
>WENV180758509
ODHW01065501
250349
Bacillota
GAA
Phe
>WENV180757796
ODHW01002022
96694
Bacillota
TAG
Leu
>WENV180757883
ODHW01002904
152045
Bacillota
CAT
Met
>WENV180758408
ODHW01035739
235701
Bacillota
TTT
Lys
>WENV180756994
ODHW01000005
154711
Bacillota
TGG
Pro
>WENV180756995
ODHW01000005
154711
Bacillota
TGG
Pro
>WENV180758297
ODHW01015688
152019
Bacillota
GAT
Ile
>WENV180757090
ODHW01000026
152046
Bacillota
TCT
Arg
>WENV180757102
ODHW01000035
237846
Bacillota
GCC
Gly
>WENV180757439
ODHW01000380
235197
Bacillota
GTC
Asp
>WENV180757471
ODHW01000463
235197
Bacillota
GTC
Asp
>WENV180758506
ODHW01065035
235197
Bacillota
GTC
Asp
>WENV180757441
ODHW01000380
368876
Bacillota
GCC
Gly
>WENV180757473
ODHW01000463
368876
Bacillota
GCC
Gly
>WENV180757579
ODHW01000710
368876
Bacillota
GCC
Gly
>WENV180758442
ODHW01042313
368876
Bacillota
GCC
Gly
>WENV180758517
ODHW01066774
368876
Bacillota
GCC
Gly
>WENV180757816
ODHW01002194
152051
Bacillota
ACG
Arg
>WENV180758091
ODHW01006036
84171
Bacillota
GAG
Leu
>WENV180758093
ODHW01006036
84171
Bacillota
GAG
Leu
>WENV180757417
ODHW01000333
298620
Bacillota
CAT
Met
>WENV180757208
ODHW01000101
241526
Bacillota
CTT
Lys
>WENV180758084
ODHW01006036
241526
Bacillota
CTT
Lys
>WENV180758342
ODHW01021747
243613
Bacillota
GTG
His
>WENV180757369
ODHW01000274
347851
Bacillota
TTC
Glu
>WENV180757461
ODHW01000423
144672
Bacillota
TCT
Arg
>WENV180757835
ODHW01002336
144672
Bacillota
TCT
Arg
>WENV180758391
ODHW01030501
152491
Bacillota
CAT
Met
>WENV180757165
ODHW01000068
241638
Bacillota
GTG
His
>WENV180757882
ODHW01002904
281472
Bacillota
GGT
Thr
>WENV180758390
ODHW01030501
281472
Bacillota
GGT
Thr
>WENV180757386
ODHW01000292
178024
Bacillota
TCT
Arg
>WENV180757775
ODHW01001897
315448
Bacillota
GGT
Thr
>WENV180757841
ODHW01002389
413657
Bacillota
CCC
Gly
>WENV180757850
ODHW01002554
413657
Bacillota
CCC
Gly
>WENV180757448
ODHW01000395
152018
Bacillota
CCT
Arg
>WENV180757658
ODHW01001012
272488
Bacillota
GAA
Phe
>WENV180757791
ODHW01002011
272488
Bacillota
GAA
Phe
>WENV180758092
ODHW01006036
81598
Bacillota
CAG
Leu
>WENV180757266
ODHW01000160
384950
Bacillota
GCC
Gly
>WENV180757366
ODHW01000273
384950
Bacillota
GCC
Gly
>WENV180757524
ODHW01000577
384950
Bacillota
GCC
Gly
>WENV180757550
ODHW01000619
384950
Bacillota
GCC
Gly
>WENV180757236
ODHW01000130
393635
Bacillota
TTC
Glu
>WENV180757270
ODHW01000160
393635
Bacillota
TTC
Glu
>WENV180758443
ODHW01042313
287034
Bacillota
GTT
Asn
>WENV180757493
ODHW01000501
413179
Bacillota
CCC
Gly
>WENV180758343
ODHW01021747
343027
Bacillota
TTG
Gln
>WENV180757680
ODHW01001159
151836
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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