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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180816004
ODJP01003284
413566
Actinomycetota
CCC
Gly
>WENV180815763
ODJP01001579
314498
Actinomycetota
GGC
Ala
>WENV180816033
ODJP01003612
314498
Actinomycetota
GGC
Ala
>WENV180815482
ODJP01000520
261773
Actinomycetota
CCT
Arg
>WENV180815776
ODJP01001636
158373
Actinomycetota
GGG
Pro
>WENV180815826
ODJP01001945
158373
Actinomycetota
GGG
Pro
>WENV180815176
ODJP01000054
161605
Actinomycetota
CAT
Met
>WENV180815307
ODJP01000184
241401
Actinomycetota
CCA
Trp
>WENV180815854
ODJP01002124
150473
Actinomycetota
CTC
Glu
>WENV180815322
ODJP01000213
149271
Actinomycetota
CAT
Met
>WENV180815298
ODJP01000175
246015
Actinomycetota
GTG
His
>WENV180816539
ODJP01021994
239204
Actinomycetota
CTT
Lys
>WENV180815423
ODJP01000361
392594
Actinomycetota
GAC
Val
>WENV180815509
ODJP01000587
392594
Actinomycetota
GAC
Val
>WENV180815637
ODJP01000955
392594
Actinomycetota
GAC
Val
>WENV180815874
ODJP01002381
392594
Actinomycetota
GAC
Val
>WENV180816909
ODJP01111772
148467
Actinomycetota
CAT
Met
>WENV180815253
ODJP01000116
246299
Actinomycetota
CTT
Lys
>WENV180815358
ODJP01000247
246222
Actinomycetota
CCG
Arg
>WENV180815291
ODJP01000165
149270
Actinomycetota
GTC
Asp
>WENV180815731
ODJP01001431
152190
Actinomycetota
GAT
Ile
>WENV180815427
ODJP01000368
162402
Actinomycetota
GGG
Pro
>WENV180815685
ODJP01001142
162402
Actinomycetota
GGG
Pro
>WENV180815634
ODJP01000952
293092
Actinomycetota
CTC
Glu
>WENV180815602
ODJP01000857
59716
Actinomycetota
CAG
Leu
>WENV180815968
ODJP01002994
240124
Actinomycetota
CGT
Thr
>WENV180816446
ODJP01014537
377770
Actinomycetota
CTG
Gln
>WENV180815426
ODJP01000361
388111
Actinomycetota
>WENV180815640
ODJP01000955
388111
Actinomycetota
>WENV180816432
ODJP01013610
155075
Actinomycetota
TCT
Arg
>WENV180816905
ODJP01107027
344380
Actinomycetota
GAC
Val
>WENV180815177
ODJP01000054
412870
Actinomycetota
TCC
Gly
>WENV180816346
ODJP01010363
241408
Actinomycetota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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