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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180842066
ODKK01102724
141635
Bacteroidota
TAC
Val
>WENV180842067
ODKK01102849
339412
Bacteroidota
GGT
Thr
>WENV180842019
ODKK01068709
119907
Bacteroidota
CAA
Leu
>WENV180841970
ODKK01043154
345063
Bacteroidota
GGT
Thr
>WENV180841889
ODKK01021617
344824
Bacteroidota
CCG
Arg
>WENV180841921
ODKK01027375
340029
Bacteroidota
TTC
Glu
>WENV180841794
ODKK01009603
155123
Bacteroidota
GTT
Asn
>WENV180841803
ODKK01010159
155123
Bacteroidota
GTT
Asn
>WENV180841847
ODKK01014831
17035
Bacteroidota
GGA
Ser
>WENV180842041
ODKK01084942
145504
Bacteroidota
TGT
Thr
>WENV180841916
ODKK01025949
320713
Bacteroidota
TTT
Lys
>WENV180842015
ODKK01066915
238671
Bacteroidota
TTT
Lys
>WENV180842060
ODKK01094346
191087
Bacteroidota
TCT
Arg
>WENV180842063
ODKK01099769
37794
Bacteroidota
TAA
Leu
>WENV180841888
ODKK01021466
414526
Bacteroidota
GCA
Cys
>WENV180842079
ODKK01114437
136207
Bacteroidota
TAC
Val
>WENV180841989
ODKK01052387
171336
Bacteroidota
GGC
Ala
>WENV180841864
ODKK01016469
81773
Bacteroidota
CAG
Leu
>WENV180842042
ODKK01085227
96147
Bacteroidota
TAG
Leu
>WENV180841972
ODKK01043961
16898
Bacteroidota
GGA
Ser
>WENV180841798
ODKK01009949
148247
Bacteroidota
TGC
Ala
>WENV180841975
ODKK01045923
235802
Bacteroidota
CAT
Met
>WENV180841769
ODKK01006021
144639
Bacteroidota
GGC
Ala
>WENV180841883
ODKK01020325
151121
Bacteroidota
CAT
Met
>WENV180841793
ODKK01009327
128241
Bacteroidota
TAC
Val
>WENV180842044
ODKK01086184
240012
Bacteroidota
CCC
Gly
>WENV180841790
ODKK01008673
369111
Bacteroidota
TTC
Glu
>WENV180841955
ODKK01037012
159335
Bacteroidota
GTT
Asn
>WENV180841979
ODKK01046965
96124
Bacteroidota
TAG
Leu
>WENV180841804
ODKK01010250
59498
Bacteroidota
GAG
Leu
>WENV180841823
ODKK01012207
302002
Bacteroidota
CGT
Thr
>WENV180842024
ODKK01070299
110457
Bacteroidota
TAG
Leu
>WENV180841924
ODKK01028073
235129
Bacteroidota
GCC
Gly
>WENV180841757
ODKK01005118
155341
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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