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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
69 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180877681
ODLV01001197
412480
Bacteroidota
>WENV180877374
ODLV01000007
95987
Bacteroidota
CAA
Leu
>WENV180877364
ODLV01000003
141635
Bacteroidota
TAC
Val
>WENV180877762
ODLV01002077
141635
Bacteroidota
TAC
Val
>WENV180878356
ODLV01044734
141635
Bacteroidota
TAC
Val
>WENV180878398
ODLV01056599
141635
Bacteroidota
TAC
Val
>WENV180878515
ODLV01112699
141635
Bacteroidota
TAC
Val
>WENV180877386
ODLV01000012
339412
Bacteroidota
GGT
Thr
>WENV180877433
ODLV01000086
339412
Bacteroidota
GGT
Thr
>WENV180878391
ODLV01054143
148097
Bacteroidota
TGG
Pro
>WENV180877516
ODLV01000194
237796
Bacteroidota
CGT
Thr
>WENV180877938
ODLV01006401
147942
Bacteroidota
GTC
Asp
>WENV180878407
ODLV01058937
97336
Bacteroidota
CAG
Leu
>WENV180877935
ODLV01006236
340120
Bacteroidota
CCT
Arg
>WENV180878019
ODLV01009187
340120
Bacteroidota
CCT
Arg
>WENV180877356
ODLV01000001
24174
Bacteroidota
GCT
Ser
>WENV180877632
ODLV01000656
24174
Bacteroidota
GCT
Ser
>WENV180878051
ODLV01010086
394247
Bacteroidota
CTC
Glu
>WENV180878052
ODLV01010086
394247
Bacteroidota
CTC
Glu
>WENV180877973
ODLV01007332
340029
Bacteroidota
TTC
Glu
>WENV180877974
ODLV01007341
413663
Bacteroidota
CTG
Gln
>WENV180877434
ODLV01000086
237797
Bacteroidota
CCA
Trp
>WENV180877406
ODLV01000033
148096
Bacteroidota
GTG
His
>WENV180877838
ODLV01003299
238811
Bacteroidota
CAT
Met
>WENV180878107
ODLV01013406
412479
Bacteroidota
TTG
Gln
>WENV180877531
ODLV01000244
155123
Bacteroidota
GTT
Asn
>WENV180877532
ODLV01000244
155123
Bacteroidota
GTT
Asn
>WENV180877912
ODLV01005593
155123
Bacteroidota
GTT
Asn
>WENV180878439
ODLV01071394
268513
Bacteroidota
TCC
Gly
>WENV180877849
ODLV01003613
176247
Bacteroidota
TCT
Arg
>WENV180877840
ODLV01003375
412439
Bacteroidota
CCA
Trp
>WENV180878071
ODLV01011450
238810
Bacteroidota
CGG
Pro
>WENV180877719
ODLV01001579
127253
Bacteroidota
GGG
Pro
>WENV180878227
ODLV01027161
238671
Bacteroidota
TTT
Lys
>WENV180877753
ODLV01002041
37076
Bacteroidota
TAA
Leu
>WENV180878237
ODLV01028017
147939
Bacteroidota
CAT
Met
>WENV180877598
ODLV01000484
339634
Bacteroidota
CCT
Arg
>WENV180877589
ODLV01000416
136207
Bacteroidota
TAC
Val
>WENV180877846
ODLV01003518
136207
Bacteroidota
TAC
Val
>WENV180878443
ODLV01074249
171336
Bacteroidota
GGC
Ala
>WENV180877875
ODLV01004169
81773
Bacteroidota
CAG
Leu
>WENV180877848
ODLV01003613
143758
Bacteroidota
TGG
Pro
>WENV180877701
ODLV01001387
96147
Bacteroidota
TAG
Leu
>WENV180877521
ODLV01000218
16898
Bacteroidota
GGA
Ser
>WENV180877713
ODLV01001512
339996
Bacteroidota
TTC
Glu
>WENV180877551
ODLV01000317
147148
Bacteroidota
CAT
Met
>WENV180878203
ODLV01024423
147148
Bacteroidota
CAT
Met
>WENV180878211
ODLV01024672
147148
Bacteroidota
CAT
Met
>WENV180878389
ODLV01054008
59182
Bacteroidota
GAG
Leu
>WENV180877685
ODLV01001255
144639
Bacteroidota
GGC
Ala
>WENV180877716
ODLV01001559
151121
Bacteroidota
CAT
Met
>WENV180877488
ODLV01000147
240012
Bacteroidota
CCC
Gly
>WENV180878183
ODLV01021114
251411
Bacteroidota
GAA
Phe
>WENV180878193
ODLV01022670
127951
Bacteroidota
TAC
Val
>WENV180877432
ODLV01000086
95986
Bacteroidota
GTA
Tyr
>WENV180877763
ODLV01002077
95986
Bacteroidota
GTA
Tyr
>WENV180877878
ODLV01004235
196394
Bacteroidota
GTC
Asp
>WENV180877879
ODLV01004235
196394
Bacteroidota
GTC
Asp
>WENV180877915
ODLV01005652
147945
Bacteroidota
CAT
Met
>WENV180877517
ODLV01000194
412236
Bacteroidota
CCC
Gly
>WENV180877950
ODLV01006751
146764
Bacteroidota
GTC
Asp
>WENV180877704
ODLV01001444
96124
Bacteroidota
TAG
Leu
>WENV180877497
ODLV01000169
59498
Bacteroidota
GAG
Leu
>WENV180877677
ODLV01001145
59498
Bacteroidota
GAG
Leu
>WENV180878408
ODLV01058937
59498
Bacteroidota
GAG
Leu
>WENV180877459
ODLV01000103
127023
Bacteroidota
GGG
Pro
>WENV180877927
ODLV01005904
147941
Bacteroidota
TGT
Thr
>WENV180878001
ODLV01008972
235129
Bacteroidota
GCC
Gly
>WENV180877660
ODLV01000925
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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