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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
72 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180914195
ODSV01022239
144612
Bacillota
TCT
Arg
>WENV180913911
ODSV01001666
235134
Bacillota
GAA
Phe
>WENV180914035
ODSV01005282
235287
Bacillota
TTT
Lys
>WENV180913838
ODSV01001080
267556
Bacillota
TAC
Val
>WENV180913841
ODSV01001082
267556
Bacillota
TAC
Val
>WENV180913868
ODSV01001306
267556
Bacillota
TAC
Val
>WENV180914203
ODSV01023464
339890
Bacillota
TTG
Gln
>WENV180914033
ODSV01005215
235098
Bacillota
GAC
Val
>WENV180914122
ODSV01010608
235098
Bacillota
GAC
Val
>WENV180914210
ODSV01025205
235098
Bacillota
GAC
Val
>WENV180914234
ODSV01033406
338152
Bacillota
TTC
Glu
>WENV180913904
ODSV01001623
148239
Bacillota
TCT
Arg
>WENV180914016
ODSV01004008
44854
Bacillota
TGA
Ser
>WENV180914326
ODSV01075713
235154
Bacillota
GTT
Asn
>WENV180914275
ODSV01049677
144577
Bacillota
GAT
Ile
>WENV180914316
ODSV01074843
37071
Bacillota
TGA
Ser
>WENV180914180
ODSV01018206
246023
Bacillota
TGC
Ala
>WENV180913999
ODSV01003551
238910
Bacillota
CTT
Lys
>WENV180913874
ODSV01001320
338147
Bacillota
CTC
Glu
>WENV180914254
ODSV01041740
235150
Bacillota
TGC
Ala
>WENV180914156
ODSV01013844
421322
Bacillota
TCC
Gly
>WENV180914120
ODSV01010232
235137
Bacillota
TGC
Ala
>WENV180914080
ODSV01007063
44859
Bacillota
AAG
Leu
>WENV180914216
ODSV01026658
11034
Bacillota
GGA
Ser
>WENV180914183
ODSV01019434
247057
Bacillota
TGC
Ala
>WENV180914019
ODSV01004243
235079
Bacillota
GAA
Phe
>WENV180914274
ODSV01049677
235087
Bacillota
TGC
Ala
>WENV180914281
ODSV01052226
149041
Bacillota
GTC
Asp
>WENV180913955
ODSV01002276
338149
Bacillota
CTC
Glu
>WENV180914041
ODSV01005602
338149
Bacillota
CTC
Glu
>WENV180914065
ODSV01006370
245298
Bacillota
CGG
Pro
>WENV180913842
ODSV01001082
155089
Bacillota
CAT
Met
>WENV180913837
ODSV01001080
144599
Bacillota
GTC
Asp
>WENV180913867
ODSV01001306
144599
Bacillota
GTC
Asp
>WENV180913870
ODSV01001306
100326
Bacillota
GTA
Tyr
>WENV180913923
ODSV01001744
100326
Bacillota
GTA
Tyr
>WENV180913905
ODSV01001623
144610
Bacillota
GTG
His
>WENV180913912
ODSV01001666
240017
Bacillota
GCC
Gly
>WENV180914064
ODSV01006370
411547
Bacillota
CTG
Gln
>WENV180914017
ODSV01004008
4624
Bacillota
GCT
Ser
>WENV180913909
ODSV01001666
263765
Bacillota
TAC
Val
>WENV180913953
ODSV01002241
263765
Bacillota
TAC
Val
>WENV180914076
ODSV01006857
18852
Bacillota
GCT
Ser
>WENV180914298
ODSV01061499
235095
Bacillota
GGT
Thr
>WENV180914148
ODSV01013363
344183
Bacillota
CTG
Gln
>WENV180914088
ODSV01008069
419639
Bacillota
GCA
Cys
>WENV180914063
ODSV01006306
411549
Bacillota
TTG
Gln
>WENV180914073
ODSV01006719
235142
Bacillota
CTT
Lys
>WENV180914079
ODSV01006933
148188
Bacillota
CCG
Arg
>WENV180914115
ODSV01009354
148188
Bacillota
CCG
Arg
>WENV180913656
ODSV01000224
256380
Bacillota
>WENV180913957
ODSV01002279
338129
Bacillota
TGT
Thr
>WENV180914164
ODSV01014734
144583
Bacillota
ACG
Arg
>WENV180914313
ODSV01074724
144652
Bacillota
GTC
Asp
>WENV180913897
ODSV01001554
247734
Bacillota
TGC
Ala
>WENV180914117
ODSV01009762
235171
Bacillota
CCA
Trp
>WENV180913764
ODSV01000753
238974
Bacillota
GAA
Phe
>WENV180913872
ODSV01001306
238974
Bacillota
GAA
Phe
>WENV180913857
ODSV01001183
235113
Bacillota
GAA
Phe
>WENV180914322
ODSV01074999
58712
Bacillota
CAG
Leu
>WENV180914204
ODSV01023951
245296
Bacillota
CCC
Gly
>WENV180913956
ODSV01002276
272992
Bacillota
CTT
Lys
>WENV180914087
ODSV01008069
344240
Bacillota
GCC
Gly
>WENV180914075
ODSV01006807
242686
Bacillota
TGC
Ala
>WENV180914198
ODSV01022489
144594
Bacillota
CAC
Val
>WENV180914226
ODSV01031702
95563
Bacillota
GTA
Tyr
>WENV180913673
ODSV01000342
414486
Bacillota
CCC
Gly
>WENV180913889
ODSV01001504
114075
Bacillota
TAG
Leu
>WENV180914123
ODSV01010862
238945
Bacillota
GCC
Gly
>WENV180914106
ODSV01009106
249259
Bacillota
GCC
Gly
>WENV180914328
ODSV01075784
249259
Bacillota
GCC
Gly
>WENV180914069
ODSV01006628
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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