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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180951442
ODUH01024447
151962
Spirochaetota
GGG
Pro
>WENV180950994
ODUH01005608
147387
Spirochaetota
CAT
Met
>WENV180951265
ODUH01014700
339370
Spirochaetota
GCA
Cys
>WENV180952247
ODUH01191718
339370
Spirochaetota
GCA
Cys
>WENV180950818
ODUH01002316
342697
Spirochaetota
TTC
Glu
>WENV180951446
ODUH01024499
342697
Spirochaetota
TTC
Glu
>WENV180951519
ODUH01028797
342697
Spirochaetota
TTC
Glu
>WENV180951709
ODUH01044407
342697
Spirochaetota
TTC
Glu
>WENV180951510
ODUH01028344
258941
Spirochaetota
GTT
Asn
>WENV180951842
ODUH01064005
258941
Spirochaetota
GTT
Asn
>WENV180951137
ODUH01009970
145470
Spirochaetota
GAT
Ile
>WENV180951269
ODUH01014909
237295
Spirochaetota
GAA
Phe
>WENV180952399
ODUH01291514
237295
Spirochaetota
GAA
Phe
>WENV180951347
ODUH01018417
237291
Spirochaetota
TTG
Gln
>WENV180952133
ODUH01136617
237291
Spirochaetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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