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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180974021
ODUW01042636
159267
Fusobacteriota
CAT
Met
>WENV180974253
ODUW01160822
151858
Fusobacteriota
GAT
Ile
>WENV180974191
ODUW01111453
151860
Fusobacteriota
ACG
Arg
>WENV180973790
ODUW01019217
151857
Fusobacteriota
TCT
Arg
>WENV180973796
ODUW01019217
156827
Fusobacteriota
GTC
Asp
>WENV180973832
ODUW01021414
115931
Fusobacteriota
TAG
Leu
>WENV180974018
ODUW01042636
115931
Fusobacteriota
TAG
Leu
>WENV180973603
ODUW01009486
152483
Fusobacteriota
GTC
Asp
>WENV180973943
ODUW01031301
246241
Fusobacteriota
TGC
Ala
>WENV180973472
ODUW01006507
343015
Fusobacteriota
TTG
Gln
>WENV180973923
ODUW01028642
242889
Fusobacteriota
TGT
Thr
>WENV180974017
ODUW01042636
242889
Fusobacteriota
TGT
Thr
>WENV180973649
ODUW01011428
60218
Fusobacteriota
CAA
Leu
>WENV180974257
ODUW01161485
242891
Fusobacteriota
CTT
Lys
>WENV180974019
ODUW01042636
286115
Fusobacteriota
GCC
Gly
>WENV180974020
ODUW01042636
151855
Fusobacteriota
TGC
Ala
>WENV180974250
ODUW01156970
243606
Fusobacteriota
TTT
Lys
>WENV180974190
ODUW01111453
151859
Fusobacteriota
TCG
Arg
>WENV180974164
ODUW01098704
152485
Fusobacteriota
TCT
Arg
>WENV180973791
ODUW01019217
127801
Fusobacteriota
CAT
Met
>WENV180973788
ODUW01019217
267548
Fusobacteriota
TCC
Gly
>WENV180973829
ODUW01021414
267548
Fusobacteriota
TCC
Gly
>WENV180973830
ODUW01021414
242887
Fusobacteriota
GTG
His
>WENV180973828
ODUW01021414
151854
Fusobacteriota
TGG
Pro
>WENV180973789
ODUW01019217
248546
Fusobacteriota
TTT
Lys
>WENV180973831
ODUW01021414
248546
Fusobacteriota
TTT
Lys
>WENV180974207
ODUW01128578
415120
Fusobacteriota
GCA
Cys
>WENV180973554
ODUW01008024
37553
Fusobacteriota
GCT
Ser
>WENV180973553
ODUW01008024
113955
Fusobacteriota
>WENV180973793
ODUW01019217
113955
Fusobacteriota
>WENV180974268
ODUW01164829
246346
Fusobacteriota
TTT
Lys
>WENV180973786
ODUW01019217
45759
Fusobacteriota
TAA
Leu
>WENV180973792
ODUW01019217
346237
Fusobacteriota
TTC
Glu
>WENV180973924
ODUW01028642
346237
Fusobacteriota
TTC
Glu
>WENV180973744
ODUW01016180
151861
Fusobacteriota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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