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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180999780
ODVT01065916
81880
Gammaproteobacteria
GAG
Leu
>WENV180999877
ODVT01093100
238438
Gammaproteobacteria
>WENV180999324
ODVT01012947
145168
Gammaproteobacteria
CAT
Met
>WENV180999961
ODVT01119197
375391
Gammaproteobacteria
TTG
Gln
>WENV180999810
ODVT01072780
23436
Gammaproteobacteria
GGA
Ser
>WENV180999802
ODVT01071638
150561
Gammaproteobacteria
ACG
Arg
>WENV180999741
ODVT01057689
339913
Gammaproteobacteria
TTT
Lys
>WENV180999742
ODVT01057689
339913
Gammaproteobacteria
TTT
Lys
>WENV180999245
ODVT01010007
254333
Gammaproteobacteria
TGT
Thr
>WENV180999344
ODVT01014255
195299
Gammaproteobacteria
CAT
Met
>WENV180999441
ODVT01019092
358575
Gammaproteobacteria
TCC
Gly
>WENV180999850
ODVT01083670
8480
Gammaproteobacteria
GCT
Ser
>WENV180999602
ODVT01035789
3278
Gammaproteobacteria
>WENV180999374
ODVT01015841
147498
Gammaproteobacteria
GAC
Val
>WENV180999835
ODVT01079368
147761
Gammaproteobacteria
TGG
Pro
>WENV180999490
ODVT01022565
24813
Gammaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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