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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181011516
ODWI01041798
48052
Fusobacteriota
TAA
Leu
>WENV181011805
ODWI01141348
242888
Fusobacteriota
GTT
Asn
>WENV181011685
ODWI01080956
151858
Fusobacteriota
GAT
Ile
>WENV181011332
ODWI01020274
151860
Fusobacteriota
ACG
Arg
>WENV181011256
ODWI01015442
151857
Fusobacteriota
TCT
Arg
>WENV181011471
ODWI01034448
156827
Fusobacteriota
GTC
Asp
>WENV181011313
ODWI01018795
115931
Fusobacteriota
TAG
Leu
>WENV181011417
ODWI01030578
115931
Fusobacteriota
TAG
Leu
>WENV181011181
ODWI01008525
152483
Fusobacteriota
GTC
Asp
>WENV181011864
ODWI01180152
152483
Fusobacteriota
GTC
Asp
>WENV181011433
ODWI01031329
246241
Fusobacteriota
TGC
Ala
>WENV181011711
ODWI01088921
246241
Fusobacteriota
TGC
Ala
>WENV181011746
ODWI01110827
246241
Fusobacteriota
TGC
Ala
>WENV181011859
ODWI01179124
246241
Fusobacteriota
TGC
Ala
>WENV181011258
ODWI01015442
342616
Fusobacteriota
TTC
Glu
>WENV181011522
ODWI01042071
248600
Fusobacteriota
GTG
His
>WENV181011468
ODWI01034173
343015
Fusobacteriota
TTG
Gln
>WENV181011561
ODWI01051257
242889
Fusobacteriota
TGT
Thr
>WENV181011333
ODWI01020274
60218
Fusobacteriota
CAA
Leu
>WENV181011311
ODWI01018795
296648
Fusobacteriota
GTG
His
>WENV181011263
ODWI01015442
242891
Fusobacteriota
CTT
Lys
>WENV181011418
ODWI01030578
151855
Fusobacteriota
TGC
Ala
>WENV181011686
ODWI01080956
151855
Fusobacteriota
TGC
Ala
>WENV181011407
ODWI01029851
243606
Fusobacteriota
TTT
Lys
>WENV181011523
ODWI01042071
243606
Fusobacteriota
TTT
Lys
>WENV181011257
ODWI01015442
127801
Fusobacteriota
CAT
Met
>WENV181011180
ODWI01008525
243607
Fusobacteriota
TAC
Val
>WENV181011314
ODWI01018795
390517
Fusobacteriota
TTG
Gln
>WENV181011309
ODWI01018795
151854
Fusobacteriota
TGG
Pro
>WENV181011255
ODWI01015442
248546
Fusobacteriota
TTT
Lys
>WENV181011312
ODWI01018795
248546
Fusobacteriota
TTT
Lys
>WENV181011240
ODWI01014384
377837
Fusobacteriota
TTC
Glu
>WENV181011261
ODWI01015442
415120
Fusobacteriota
GCA
Cys
>WENV181011315
ODWI01019047
37553
Fusobacteriota
GCT
Ser
>WENV181011259
ODWI01015442
113955
Fusobacteriota
>WENV181011884
ODWI01190334
246346
Fusobacteriota
TTT
Lys
>WENV181011252
ODWI01015442
45759
Fusobacteriota
TAA
Leu
>WENV181011658
ODWI01072464
151861
Fusobacteriota
CCT
Arg
>WENV181011419
ODWI01030578
200772
Fusobacteriota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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