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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181025593
ODXB01006886
243647
Bacillota
TTT
Lys
>WENV181025478
ODXB01001369
178679
Bacillota
CAT
Met
>WENV181025589
ODXB01006789
16834
Bacillota
GCT
Ser
>WENV181025685
ODXB01014178
114002
Bacillota
CAA
Leu
>WENV181025929
ODXB01089411
37437
Bacillota
TAA
Leu
>WENV181025474
ODXB01001369
162028
Bacillota
ACG
Arg
>WENV181025484
ODXB01001369
113951
Bacillota
GTA
Tyr
>WENV181025772
ODXB01027545
113951
Bacillota
GTA
Tyr
>WENV181025794
ODXB01033029
113951
Bacillota
GTA
Tyr
>WENV181025966
ODXB01108912
113951
Bacillota
GTA
Tyr
>WENV181025888
ODXB01071906
243612
Bacillota
TAC
Val
>WENV181025684
ODXB01014112
338676
Bacillota
CCG
Arg
>WENV181025625
ODXB01009130
147135
Bacillota
ACG
Arg
>WENV181025482
ODXB01001369
242848
Bacillota
GAA
Phe
>WENV181025657
ODXB01012633
242848
Bacillota
GAA
Phe
>WENV181025748
ODXB01021619
242848
Bacillota
GAA
Phe
>WENV181025670
ODXB01013661
199741
Bacillota
CAT
Met
>WENV181025784
ODXB01029815
342895
Bacillota
CAT
Met
>WENV181025620
ODXB01008444
190275
Bacillota
TCT
Arg
>WENV181025649
ODXB01012524
194150
Bacillota
TGG
Pro
>WENV181025598
ODXB01007125
235197
Bacillota
GTC
Asp
>WENV181025630
ODXB01009577
368876
Bacillota
GCC
Gly
>WENV181025445
ODXB01000671
147183
Bacillota
GTT
Asn
>WENV181025457
ODXB01000827
147183
Bacillota
GTT
Asn
>WENV181025532
ODXB01002708
147183
Bacillota
GTT
Asn
>WENV181025653
ODXB01012633
147183
Bacillota
GTT
Asn
>WENV181025769
ODXB01027545
147183
Bacillota
GTT
Asn
>WENV181025591
ODXB01006886
243613
Bacillota
GTG
His
>WENV181025470
ODXB01001369
256920
Bacillota
TTT
Lys
>WENV181025494
ODXB01001423
256920
Bacillota
TTT
Lys
>WENV181025563
ODXB01004913
256920
Bacillota
TTT
Lys
>WENV181025866
ODXB01060847
256920
Bacillota
TTT
Lys
>WENV181025700
ODXB01015177
152491
Bacillota
CAT
Met
>WENV181025696
ODXB01015177
273029
Bacillota
TGT
Thr
>WENV181025699
ODXB01015177
281472
Bacillota
GGT
Thr
>WENV181025651
ODXB01012524
178024
Bacillota
TCT
Arg
>WENV181025533
ODXB01002772
413657
Bacillota
CCC
Gly
>WENV181025407
ODXB01000242
115876
Bacillota
GTA
Tyr
>WENV181025460
ODXB01000899
115876
Bacillota
GTA
Tyr
>WENV181025631
ODXB01009577
287034
Bacillota
GTT
Asn
>WENV181025645
ODXB01011191
287034
Bacillota
GTT
Asn
>WENV181025592
ODXB01006886
343027
Bacillota
TTG
Gln
>WENV181025764
ODXB01025901
151836
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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