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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181025502
ODXB01001826
81880
Gammaproteobacteria
GAG
Leu
>WENV181025454
ODXB01000819
30640
Gammaproteobacteria
GGA
Ser
>WENV181025430
ODXB01000498
3276
Gammaproteobacteria
>WENV181025438
ODXB01000580
3276
Gammaproteobacteria
>WENV181025374
ODXB01000054
80672
Gammaproteobacteria
GAG
Leu
>WENV181025420
ODXB01000398
3972
Gammaproteobacteria
GCT
Ser
>WENV181025416
ODXB01000304
254333
Gammaproteobacteria
TGT
Thr
>WENV181025426
ODXB01000475
3247
Gammaproteobacteria
GCT
Ser
>WENV181025355
ODXB01000020
58828
Gammaproteobacteria
TAA
Leu
>WENV181025359
ODXB01000022
58828
Gammaproteobacteria
TAA
Leu
>WENV181025497
ODXB01001528
146713
Gammaproteobacteria
GAC
Val
>WENV181025428
ODXB01000495
268376
Gammaproteobacteria
CTT
Lys
>WENV181025766
ODXB01026465
268376
Gammaproteobacteria
CTT
Lys
>WENV181025390
ODXB01000128
243644
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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