This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181028637
ODXE01007770
196621
Bacillota
GTC
Asp
>WENV181028797
ODXE01014604
196621
Bacillota
GTC
Asp
>WENV181028966
ODXE01047388
196621
Bacillota
GTC
Asp
>WENV181028886
ODXE01026579
144612
Bacillota
TCT
Arg
>WENV181028536
ODXE01004658
235098
Bacillota
GAC
Val
>WENV181028623
ODXE01007062
235098
Bacillota
GAC
Val
>WENV181028882
ODXE01024819
235098
Bacillota
GAC
Val
>WENV181029021
ODXE01069754
235098
Bacillota
GAC
Val
>WENV181028589
ODXE01006001
148239
Bacillota
TCT
Arg
>WENV181028412
ODXE01002292
44854
Bacillota
TGA
Ser
>WENV181029015
ODXE01068878
144577
Bacillota
GAT
Ile
>WENV181029029
ODXE01075464
59312
Bacillota
CAG
Leu
>WENV181028971
ODXE01048799
338147
Bacillota
CTC
Glu
>WENV181028876
ODXE01023399
235150
Bacillota
TGC
Ala
>WENV181029005
ODXE01066684
235150
Bacillota
TGC
Ala
>WENV181029072
ODXE01111556
428544
Bacillota
GCA
Cys
>WENV181028555
ODXE01005023
11034
Bacillota
GGA
Ser
>WENV181028636
ODXE01007770
235117
Bacillota
TAC
Val
>WENV181029104
ODXE01149016
235117
Bacillota
TAC
Val
>WENV181028590
ODXE01006001
156937
Bacillota
GTG
His
>WENV181028391
ODXE01002047
274189
Bacillota
TGT
Thr
>WENV181028638
ODXE01007770
235079
Bacillota
GAA
Phe
>WENV181029113
ODXE01149409
235079
Bacillota
GAA
Phe
>WENV181029014
ODXE01068878
235087
Bacillota
TGC
Ala
>WENV181028665
ODXE01008529
173314
Bacillota
GAT
Ile
>WENV181028537
ODXE01004681
338149
Bacillota
CTC
Glu
>WENV181028731
ODXE01011233
338149
Bacillota
CTC
Glu
>WENV181029107
ODXE01149093
338149
Bacillota
CTC
Glu
>WENV181029119
ODXE01150542
338149
Bacillota
CTC
Glu
>WENV181028116
ODXE01000135
271471
Bacillota
GCC
Gly
>WENV181028609
ODXE01006531
245298
Bacillota
CGG
Pro
>WENV181028652
ODXE01008278
169968
Bacillota
CAT
Met
>WENV181028960
ODXE01045450
153911
Bacillota
GAT
Ile
>WENV181029030
ODXE01076806
144610
Bacillota
GTG
His
>WENV181028434
ODXE01002709
411547
Bacillota
CTG
Gln
>WENV181028608
ODXE01006531
411547
Bacillota
CTG
Gln
>WENV181028413
ODXE01002292
4624
Bacillota
GCT
Ser
>WENV181028113
ODXE01000135
263765
Bacillota
TAC
Val
>WENV181028172
ODXE01000305
263765
Bacillota
TAC
Val
>WENV181028580
ODXE01005694
263765
Bacillota
TAC
Val
>WENV181028967
ODXE01047388
235095
Bacillota
GGT
Thr
>WENV181029050
ODXE01095004
235095
Bacillota
GGT
Thr
>WENV181028333
ODXE01001342
419639
Bacillota
GCA
Cys
>WENV181029011
ODXE01068084
411549
Bacillota
TTG
Gln
>WENV181028630
ODXE01007405
148188
Bacillota
CCG
Arg
>WENV181029044
ODXE01089891
148188
Bacillota
CCG
Arg
>WENV181028401
ODXE01002147
80612
Bacillota
GTA
Tyr
>WENV181028620
ODXE01006922
80612
Bacillota
GTA
Tyr
>WENV181028743
ODXE01011567
80612
Bacillota
GTA
Tyr
>WENV181029009
ODXE01068059
80612
Bacillota
GTA
Tyr
>WENV181029025
ODXE01073704
80612
Bacillota
GTA
Tyr
>WENV181028892
ODXE01028270
235127
Bacillota
TTT
Lys
>WENV181028688
ODXE01009484
235124
Bacillota
TGG
Pro
>WENV181028801
ODXE01014767
338129
Bacillota
TGT
Thr
>WENV181028855
ODXE01020079
157838
Bacillota
GTC
Asp
>WENV181029077
ODXE01118564
157838
Bacillota
GTC
Asp
>WENV181028308
ODXE01001194
144583
Bacillota
ACG
Arg
>WENV181028901
ODXE01030876
235171
Bacillota
CCA
Trp
>WENV181028347
ODXE01001537
144621
Bacillota
GTT
Asn
>WENV181028732
ODXE01011233
144621
Bacillota
GTT
Asn
>WENV181028706
ODXE01010015
277200
Bacillota
GGC
Ala
>WENV181028698
ODXE01009759
243098
Bacillota
GGT
Thr
>WENV181028456
ODXE01003074
58712
Bacillota
CAG
Leu
>WENV181028503
ODXE01003868
58712
Bacillota
CAG
Leu
>WENV181028947
ODXE01041969
58712
Bacillota
CAG
Leu
>WENV181028950
ODXE01043677
58712
Bacillota
CAG
Leu
>WENV181028247
ODXE01000757
245296
Bacillota
CCC
Gly
>WENV181028538
ODXE01004681
272992
Bacillota
CTT
Lys
>WENV181028903
ODXE01031017
272992
Bacillota
CTT
Lys
>WENV181028986
ODXE01057552
272992
Bacillota
CTT
Lys
>WENV181029108
ODXE01149093
272992
Bacillota
CTT
Lys
>WENV181028345
ODXE01001507
344240
Bacillota
GCC
Gly
>WENV181028517
ODXE01004127
196632
Bacillota
GTC
Asp
>WENV181028535
ODXE01004650
144594
Bacillota
CAC
Val
>WENV181028918
ODXE01034248
144594
Bacillota
CAC
Val
>WENV181028653
ODXE01008278
272488
Bacillota
GAA
Phe
>WENV181029089
ODXE01128148
114075
Bacillota
TAG
Leu
>WENV181028448
ODXE01003015
338128
Bacillota
TTC
Glu
>WENV181028668
ODXE01008718
338128
Bacillota
TTC
Glu
>WENV181028518
ODXE01004127
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK