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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181030354
ODXG01003066
243275
Actinomycetota
CCT
Arg
>WENV181030371
ODXG01008583
235615
Actinomycetota
TGC
Ala
>WENV181030348
ODXG01000917
37831
Actinomycetota
GGA
Ser
>WENV181030375
ODXG01010356
193208
Actinomycetota
CGG
Pro
>WENV181030337
ODXG01000577
235606
Actinomycetota
GGT
Thr
>WENV181030355
ODXG01003339
3286
Actinomycetota
>WENV181030347
ODXG01000803
145272
Actinomycetota
CAT
Met
>WENV181030374
ODXG01010144
145052
Actinomycetota
GAT
Ile
>WENV181030338
ODXG01000577
338474
Actinomycetota
CAT
Met
>WENV181030367
ODXG01007007
345157
Actinomycetota
CAC
Val
>WENV181030333
ODXG01000166
239213
Actinomycetota
CCA
Trp
>WENV181030362
ODXG01004937
155156
Actinomycetota
CCG
Arg
>WENV181030350
ODXG01001877
338387
Actinomycetota
>WENV181030353
ODXG01003043
412586
Actinomycetota
CCC
Gly
>WENV181030377
ODXG01011080
175774
Actinomycetota
GTC
Asp
>WENV181030340
ODXG01000606
235609
Actinomycetota
CTT
Lys
>WENV181030335
ODXG01000483
368647
Actinomycetota
CTG
Gln
>WENV181030376
ODXG01010711
270497
Actinomycetota
GAA
Phe
>WENV181030368
ODXG01007197
239209
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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