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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
128 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181033105
ODXN01002575
243647
Bacillota
TTT
Lys
>WENV181033716
ODXN01020701
243647
Bacillota
TTT
Lys
>WENV181034287
ODXN01165251
243647
Bacillota
TTT
Lys
>WENV181032438
ODXN01000034
178679
Bacillota
CAT
Met
>WENV181033858
ODXN01032974
16842
Bacillota
CGA
Ser
>WENV181034063
ODXN01060866
16842
Bacillota
CGA
Ser
>WENV181034292
ODXN01170092
16842
Bacillota
CGA
Ser
>WENV181032599
ODXN01000204
37213
Bacillota
TGA
Ser
>WENV181033011
ODXN01001882
37213
Bacillota
TGA
Ser
>WENV181033148
ODXN01002993
342730
Bacillota
CTC
Glu
>WENV181033369
ODXN01005959
267649
Bacillota
TAC
Val
>WENV181033856
ODXN01032939
267649
Bacillota
TAC
Val
>WENV181033006
ODXN01001868
246392
Bacillota
GTT
Asn
>WENV181034185
ODXN01106667
155040
Bacillota
GAT
Ile
>WENV181034090
ODXN01065259
338152
Bacillota
TTC
Glu
>WENV181032512
ODXN01000097
37549
Bacillota
TAA
Leu
>WENV181032887
ODXN01001075
148348
Bacillota
GTC
Asp
>WENV181033454
ODXN01008312
148348
Bacillota
GTC
Asp
>WENV181033449
ODXN01008312
243099
Bacillota
GTT
Asn
>WENV181033706
ODXN01019895
243099
Bacillota
GTT
Asn
>WENV181032507
ODXN01000097
243119
Bacillota
CTT
Lys
>WENV181034319
ODXN01184955
235150
Bacillota
TGC
Ala
>WENV181033539
ODXN01010769
152047
Bacillota
GGG
Pro
>WENV181033580
ODXN01012404
235137
Bacillota
TGC
Ala
>WENV181034039
ODXN01056761
235137
Bacillota
TGC
Ala
>WENV181034049
ODXN01057483
235137
Bacillota
TGC
Ala
>WENV181034102
ODXN01068695
235137
Bacillota
TGC
Ala
>WENV181034325
ODXN01185904
235137
Bacillota
TGC
Ala
>WENV181033008
ODXN01001868
241761
Bacillota
TAC
Val
>WENV181033243
ODXN01003801
241761
Bacillota
TAC
Val
>WENV181033453
ODXN01008312
241761
Bacillota
TAC
Val
>WENV181033289
ODXN01004550
16834
Bacillota
GCT
Ser
>WENV181033801
ODXN01028310
16834
Bacillota
GCT
Ser
>WENV181033817
ODXN01030788
16834
Bacillota
GCT
Ser
>WENV181034286
ODXN01165102
16834
Bacillota
GCT
Ser
>WENV181033104
ODXN01002575
243646
Bacillota
GTT
Asn
>WENV181034238
ODXN01136745
243646
Bacillota
GTT
Asn
>WENV181032921
ODXN01001267
114002
Bacillota
CAA
Leu
>WENV181032672
ODXN01000398
342736
Bacillota
TTG
Gln
>WENV181033885
ODXN01035020
37437
Bacillota
TAA
Leu
>WENV181034290
ODXN01167140
37437
Bacillota
TAA
Leu
>WENV181033239
ODXN01003801
296878
Bacillota
GTT
Asn
>WENV181033826
ODXN01031070
296878
Bacillota
GTT
Asn
>WENV181034188
ODXN01107876
296878
Bacillota
GTT
Asn
>WENV181032510
ODXN01000097
340265
Bacillota
GCC
Gly
>WENV181033195
ODXN01003452
340265
Bacillota
GCC
Gly
>WENV181033238
ODXN01003801
340265
Bacillota
GCC
Gly
>WENV181033428
ODXN01007510
340265
Bacillota
GCC
Gly
>WENV181033901
ODXN01036902
162028
Bacillota
ACG
Arg
>WENV181032444
ODXN01000034
113951
Bacillota
GTA
Tyr
>WENV181032765
ODXN01000584
113951
Bacillota
GTA
Tyr
>WENV181033107
ODXN01002575
243612
Bacillota
TAC
Val
>WENV181034096
ODXN01065729
243612
Bacillota
TAC
Val
>WENV181034282
ODXN01161902
243612
Bacillota
TAC
Val
>WENV181032986
ODXN01001805
199366
Bacillota
CAT
Met
>WENV181033063
ODXN01002227
199366
Bacillota
CAT
Met
>WENV181032989
ODXN01001829
155089
Bacillota
CAT
Met
>WENV181033437
ODXN01007901
155089
Bacillota
CAT
Met
>WENV181032723
ODXN01000497
37551
Bacillota
CGA
Ser
>WENV181033302
ODXN01004723
341796
Bacillota
CCG
Arg
>WENV181032888
ODXN01001075
286137
Bacillota
GAA
Phe
>WENV181033455
ODXN01008312
286137
Bacillota
GAA
Phe
>WENV181032985
ODXN01001805
81373
Bacillota
GTA
Tyr
>WENV181033041
ODXN01002114
81373
Bacillota
GTA
Tyr
>WENV181033062
ODXN01002227
81373
Bacillota
GTA
Tyr
>WENV181033983
ODXN01048398
147135
Bacillota
ACG
Arg
>WENV181034252
ODXN01149178
144599
Bacillota
GTC
Asp
>WENV181033387
ODXN01006338
148268
Bacillota
CGG
Pro
>WENV181032442
ODXN01000034
242848
Bacillota
GAA
Phe
>WENV181032741
ODXN01000527
242848
Bacillota
GAA
Phe
>WENV181032860
ODXN01000964
342895
Bacillota
CAT
Met
>WENV181033320
ODXN01005098
342895
Bacillota
CAT
Met
>WENV181032721
ODXN01000495
18852
Bacillota
GCT
Ser
>WENV181034027
ODXN01054385
18852
Bacillota
GCT
Ser
>WENV181032511
ODXN01000097
419945
Bacillota
GCA
Cys
>WENV181033640
ODXN01016245
194150
Bacillota
TGG
Pro
>WENV181034122
ODXN01075801
194150
Bacillota
TGG
Pro
>WENV181033927
ODXN01040548
241471
Bacillota
TGC
Ala
>WENV181032795
ODXN01000651
185292
Bacillota
ACG
Arg
>WENV181033786
ODXN01027135
185292
Bacillota
ACG
Arg
>WENV181032973
ODXN01001647
96694
Bacillota
TAG
Leu
>WENV181033085
ODXN01002472
152045
Bacillota
CAT
Met
>WENV181034125
ODXN01077613
235701
Bacillota
TTT
Lys
>WENV181032487
ODXN01000071
154711
Bacillota
TGG
Pro
>WENV181033928
ODXN01040548
152019
Bacillota
GAT
Ile
>WENV181033024
ODXN01001952
152046
Bacillota
TCT
Arg
>WENV181032730
ODXN01000503
237846
Bacillota
GCC
Gly
>WENV181032865
ODXN01001029
237846
Bacillota
GCC
Gly
>WENV181033237
ODXN01003786
237846
Bacillota
GCC
Gly
>WENV181033741
ODXN01022221
237846
Bacillota
GCC
Gly
>WENV181034254
ODXN01150896
237846
Bacillota
GCC
Gly
>WENV181032641
ODXN01000286
235197
Bacillota
GTC
Asp
>WENV181033375
ODXN01006099
235197
Bacillota
GTC
Asp
>WENV181034297
ODXN01175422
235197
Bacillota
GTC
Asp
>WENV181033103
ODXN01002575
368876
Bacillota
GCC
Gly
>WENV181033610
ODXN01013599
368876
Bacillota
GCC
Gly
>WENV181033883
ODXN01035020
368876
Bacillota
GCC
Gly
>WENV181034187
ODXN01107876
368876
Bacillota
GCC
Gly
>WENV181034237
ODXN01136745
368876
Bacillota
GCC
Gly
>WENV181033550
ODXN01011043
152051
Bacillota
ACG
Arg
>WENV181033459
ODXN01008312
84171
Bacillota
GAG
Leu
>WENV181033461
ODXN01008312
84171
Bacillota
GAG
Leu
>WENV181032677
ODXN01000406
298620
Bacillota
CAT
Met
>WENV181033452
ODXN01008312
241526
Bacillota
CTT
Lys
>WENV181033538
ODXN01010708
241526
Bacillota
CTT
Lys
>WENV181032826
ODXN01000762
157838
Bacillota
GTC
Asp
>WENV181034034
ODXN01056488
243613
Bacillota
GTG
His
>WENV181032886
ODXN01001075
347851
Bacillota
TTC
Glu
>WENV181033161
ODXN01003218
144672
Bacillota
TCT
Arg
>WENV181033413
ODXN01006940
127572
Bacillota
ACG
Arg
>WENV181032767
ODXN01000584
256920
Bacillota
TTT
Lys
>WENV181033897
ODXN01036902
256920
Bacillota
TTT
Lys
>WENV181033660
ODXN01016831
152491
Bacillota
CAT
Met
>WENV181033287
ODXN01004524
241638
Bacillota
GTG
His
>WENV181033980
ODXN01048146
194064
Bacillota
GAT
Ile
>WENV181033656
ODXN01016831
273029
Bacillota
TGT
Thr
>WENV181033084
ODXN01002472
281472
Bacillota
GGT
Thr
>WENV181033659
ODXN01016831
281472
Bacillota
GGT
Thr
>WENV181034124
ODXN01075801
178024
Bacillota
TCT
Arg
>WENV181033698
ODXN01019242
413657
Bacillota
CCC
Gly
>WENV181033501
ODXN01009976
152018
Bacillota
CCT
Arg
>WENV181033245
ODXN01003822
272488
Bacillota
GAA
Phe
>WENV181033931
ODXN01040985
272488
Bacillota
GAA
Phe
>WENV181033460
ODXN01008312
81598
Bacillota
CAG
Leu
>WENV181033676
ODXN01017594
413179
Bacillota
CCC
Gly
>WENV181032897
ODXN01001125
273862
Bacillota
TGC
Ala
>WENV181034035
ODXN01056488
343027
Bacillota
TTG
Gln
>WENV181032431
ODXN01000029
151836
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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