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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
125 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181053877
ODYI01000912
196621
Bacillota
GTC
Asp
>WENV181054638
ODYI01008251
196621
Bacillota
GTC
Asp
>WENV181055142
ODYI01070656
196621
Bacillota
GTC
Asp
>WENV181055428
ODYI01240774
196621
Bacillota
GTC
Asp
>WENV181055441
ODYI01241930
196621
Bacillota
GTC
Asp
>WENV181055469
ODYI01245464
196621
Bacillota
GTC
Asp
>WENV181055214
ODYI01093045
155958
Bacillota
GAT
Ile
>WENV181054641
ODYI01008272
309417
Bacillota
GGC
Ala
>WENV181054904
ODYI01022990
309417
Bacillota
GGC
Ala
>WENV181053328
ODYI01000111
156958
Bacillota
GAT
Ile
>WENV181055095
ODYI01056696
158247
Bacillota
>WENV181054571
ODYI01006693
144612
Bacillota
TCT
Arg
>WENV181055203
ODYI01090636
144612
Bacillota
TCT
Arg
>WENV181054790
ODYI01014965
339890
Bacillota
TTG
Gln
>WENV181054238
ODYI01002608
235098
Bacillota
GAC
Val
>WENV181054762
ODYI01013082
235098
Bacillota
GAC
Val
>WENV181054891
ODYI01021188
235098
Bacillota
GAC
Val
>WENV181055440
ODYI01241927
235098
Bacillota
GAC
Val
>WENV181055446
ODYI01243494
235098
Bacillota
GAC
Val
>WENV181053834
ODYI01000813
44854
Bacillota
TGA
Ser
>WENV181053080
ODYI01000007
20749
Bacillota
GCT
Ser
>WENV181054853
ODYI01018992
144577
Bacillota
GAT
Ile
>WENV181054938
ODYI01026222
304022
Bacillota
GCC
Gly
>WENV181055000
ODYI01034446
304022
Bacillota
GCC
Gly
>WENV181055144
ODYI01070656
304022
Bacillota
GCC
Gly
>WENV181055459
ODYI01245142
304022
Bacillota
GCC
Gly
>WENV181055460
ODYI01245219
304022
Bacillota
GCC
Gly
>WENV181054706
ODYI01010917
307003
Bacillota
TGC
Ala
>WENV181054691
ODYI01010022
238910
Bacillota
CTT
Lys
>WENV181055081
ODYI01053902
338147
Bacillota
CTC
Glu
>WENV181054843
ODYI01018300
235150
Bacillota
TGC
Ala
>WENV181055269
ODYI01119659
235150
Bacillota
TGC
Ala
>WENV181055284
ODYI01125979
235150
Bacillota
TGC
Ala
>WENV181054311
ODYI01003215
155273
Bacillota
CAT
Met
>WENV181055270
ODYI01119669
235137
Bacillota
TGC
Ala
>WENV181054622
ODYI01007831
293599
Bacillota
CTT
Lys
>WENV181053213
ODYI01000051
281701
Bacillota
TGC
Ala
>WENV181053953
ODYI01001126
388249
Bacillota
GCA
Cys
>WENV181054778
ODYI01014145
388249
Bacillota
GCA
Cys
>WENV181055036
ODYI01042802
144668
Bacillota
GTC
Asp
>WENV181054966
ODYI01031235
198770
Bacillota
GTC
Asp
>WENV181055447
ODYI01243638
429429
Bacillota
CCA
Trp
>WENV181054323
ODYI01003375
313454
Bacillota
GAA
Phe
>WENV181055037
ODYI01042802
41154
Bacillota
TAA
Leu
>WENV181055311
ODYI01144240
44859
Bacillota
AAG
Leu
>WENV181054077
ODYI01001661
11034
Bacillota
GGA
Ser
>WENV181055439
ODYI01241833
235117
Bacillota
TAC
Val
>WENV181055217
ODYI01094377
156937
Bacillota
GTG
His
>WENV181055143
ODYI01070656
235079
Bacillota
GAA
Phe
>WENV181055461
ODYI01245225
235079
Bacillota
GAA
Phe
>WENV181055412
ODYI01232228
235087
Bacillota
TGC
Ala
>WENV181054690
ODYI01009932
173314
Bacillota
GAT
Ile
>WENV181054675
ODYI01009341
338149
Bacillota
CTC
Glu
>WENV181055178
ODYI01082972
338149
Bacillota
CTC
Glu
>WENV181055432
ODYI01241016
338149
Bacillota
CTC
Glu
>WENV181055442
ODYI01242098
338149
Bacillota
CTC
Glu
>WENV181055086
ODYI01055812
271471
Bacillota
GCC
Gly
>WENV181055434
ODYI01241134
245298
Bacillota
CGG
Pro
>WENV181055100
ODYI01057995
37269
Bacillota
TGA
Ser
>WENV181055365
ODYI01185573
37269
Bacillota
TGA
Ser
>WENV181055454
ODYI01244997
169968
Bacillota
CAT
Met
>WENV181055325
ODYI01160127
152492
Bacillota
GGG
Pro
>WENV181053949
ODYI01001126
235078
Bacillota
TAC
Val
>WENV181054752
ODYI01012640
235078
Bacillota
TAC
Val
>WENV181055438
ODYI01241756
144610
Bacillota
GTG
His
>WENV181055344
ODYI01172773
240017
Bacillota
GCC
Gly
>WENV181053435
ODYI01000181
411547
Bacillota
CTG
Gln
>WENV181054829
ODYI01017512
411547
Bacillota
CTG
Gln
>WENV181055140
ODYI01069888
411547
Bacillota
CTG
Gln
>WENV181055464
ODYI01245399
411547
Bacillota
CTG
Gln
>WENV181053631
ODYI01000377
157156
Bacillota
TCT
Arg
>WENV181053835
ODYI01000813
4624
Bacillota
GCT
Ser
>WENV181055028
ODYI01041416
242249
Bacillota
TAC
Val
>WENV181055288
ODYI01129155
412387
Bacillota
GCA
Cys
>WENV181053605
ODYI01000345
313104
Bacillota
TAC
Val
>WENV181053965
ODYI01001167
313104
Bacillota
TAC
Val
>WENV181053878
ODYI01000912
235095
Bacillota
GGT
Thr
>WENV181054268
ODYI01002845
235095
Bacillota
GGT
Thr
>WENV181054639
ODYI01008251
235095
Bacillota
GGT
Thr
>WENV181054640
ODYI01008251
235095
Bacillota
GGT
Thr
>WENV181054959
ODYI01030509
235095
Bacillota
GGT
Thr
>WENV181055429
ODYI01240774
235095
Bacillota
GGT
Thr
>WENV181055374
ODYI01193589
419639
Bacillota
GCA
Cys
>WENV181053657
ODYI01000419
411549
Bacillota
TTG
Gln
>WENV181054694
ODYI01010390
411549
Bacillota
TTG
Gln
>WENV181054650
ODYI01008464
148188
Bacillota
CCG
Arg
>WENV181055215
ODYI01093385
148188
Bacillota
CCG
Arg
>WENV181054649
ODYI01008395
80612
Bacillota
GTA
Tyr
>WENV181054956
ODYI01029195
80612
Bacillota
GTA
Tyr
>WENV181054682
ODYI01009674
80612
Bacillota
GTA
Tyr
>WENV181054985
ODYI01032808
235127
Bacillota
TTT
Lys
>WENV181053316
ODYI01000105
163943
Bacillota
GTC
Asp
>WENV181053567
ODYI01000296
163943
Bacillota
GTC
Asp
>WENV181055392
ODYI01211387
241432
Bacillota
TGT
Thr
>WENV181054264
ODYI01002825
235124
Bacillota
TGG
Pro
>WENV181054712
ODYI01011115
235124
Bacillota
TGG
Pro
>WENV181054848
ODYI01018755
235124
Bacillota
TGG
Pro
>WENV181054895
ODYI01022066
235124
Bacillota
TGG
Pro
>WENV181054253
ODYI01002749
338129
Bacillota
TGT
Thr
>WENV181053397
ODYI01000156
157838
Bacillota
GTC
Asp
>WENV181053918
ODYI01001041
144583
Bacillota
ACG
Arg
>WENV181054290
ODYI01003050
144583
Bacillota
ACG
Arg
>WENV181055279
ODYI01121863
144583
Bacillota
ACG
Arg
>WENV181054866
ODYI01019863
247734
Bacillota
TGC
Ala
>WENV181054637
ODYI01008251
235171
Bacillota
CCA
Trp
>WENV181053990
ODYI01001293
144621
Bacillota
GTT
Asn
>WENV181054676
ODYI01009341
144621
Bacillota
GTT
Asn
>WENV181055419
ODYI01236137
235113
Bacillota
GAA
Phe
>WENV181053875
ODYI01000912
58712
Bacillota
CAG
Leu
>WENV181053977
ODYI01001212
58712
Bacillota
CAG
Leu
>WENV181055125
ODYI01063683
58712
Bacillota
CAG
Leu
>WENV181055450
ODYI01244101
58712
Bacillota
CAG
Leu
>WENV181055361
ODYI01183278
21693
Bacillota
GCT
Ser
>WENV181053666
ODYI01000441
245296
Bacillota
CCC
Gly
>WENV181054755
ODYI01012701
245296
Bacillota
CCC
Gly
>WENV181055179
ODYI01082972
272992
Bacillota
CTT
Lys
>WENV181055225
ODYI01097166
272992
Bacillota
CTT
Lys
>WENV181055265
ODYI01119127
272992
Bacillota
CTT
Lys
>WENV181054689
ODYI01009932
299139
Bacillota
TGC
Ala
>WENV181053409
ODYI01000161
144594
Bacillota
CAC
Val
>WENV181054817
ODYI01016610
144594
Bacillota
CAC
Val
>WENV181054917
ODYI01024171
144594
Bacillota
CAC
Val
>WENV181055303
ODYI01139202
95563
Bacillota
GTA
Tyr
>WENV181053418
ODYI01000167
338128
Bacillota
TTC
Glu
>WENV181053927
ODYI01001074
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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