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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181096842
OECA01000533
48052
Fusobacteriota
TAA
Leu
>WENV181098264
OECA01171859
242888
Fusobacteriota
GTT
Asn
>WENV181098252
OECA01167902
151858
Fusobacteriota
GAT
Ile
>WENV181097284
OECA01004990
151860
Fusobacteriota
ACG
Arg
>WENV181097114
OECA01002537
151857
Fusobacteriota
TCT
Arg
>WENV181097596
OECA01015475
156827
Fusobacteriota
GTC
Asp
>WENV181097010
OECA01001572
115931
Fusobacteriota
TAG
Leu
>WENV181098198
OECA01133977
115931
Fusobacteriota
TAG
Leu
>WENV181096935
OECA01001013
152483
Fusobacteriota
GTC
Asp
>WENV181097302
OECA01005234
152483
Fusobacteriota
GTC
Asp
>WENV181097590
OECA01015130
152483
Fusobacteriota
GTC
Asp
>WENV181098282
OECA01186696
246241
Fusobacteriota
TGC
Ala
>WENV181098294
OECA01187788
342616
Fusobacteriota
TTC
Glu
>WENV181097368
OECA01006799
248600
Fusobacteriota
GTG
His
>WENV181098257
OECA01170408
343015
Fusobacteriota
TTG
Gln
>WENV181097092
OECA01002177
242889
Fusobacteriota
TGT
Thr
>WENV181097285
OECA01004990
60218
Fusobacteriota
CAA
Leu
>WENV181097008
OECA01001572
296648
Fusobacteriota
GTG
His
>WENV181097600
OECA01015475
242891
Fusobacteriota
CTT
Lys
>WENV181098255
OECA01169175
286115
Fusobacteriota
GCC
Gly
>WENV181097348
OECA01006650
151855
Fusobacteriota
TGC
Ala
>WENV181097369
OECA01006799
243606
Fusobacteriota
TTT
Lys
>WENV181097672
OECA01020046
152485
Fusobacteriota
TCT
Arg
>WENV181097115
OECA01002537
127801
Fusobacteriota
CAT
Met
>WENV181097953
OECA01049601
154976
Fusobacteriota
TCG
Arg
>WENV181097011
OECA01001572
390517
Fusobacteriota
TTG
Gln
>WENV181097345
OECA01006605
390517
Fusobacteriota
TTG
Gln
>WENV181097006
OECA01001572
151854
Fusobacteriota
TGG
Pro
>WENV181097344
OECA01006605
151854
Fusobacteriota
TGG
Pro
>WENV181097009
OECA01001572
248546
Fusobacteriota
TTT
Lys
>WENV181097113
OECA01002537
248546
Fusobacteriota
TTT
Lys
>WENV181097093
OECA01002177
377837
Fusobacteriota
TTC
Glu
>WENV181098290
OECA01187727
377837
Fusobacteriota
TTC
Glu
>WENV181097598
OECA01015475
415120
Fusobacteriota
GCA
Cys
>WENV181097099
OECA01002299
37553
Fusobacteriota
GCT
Ser
>WENV181098256
OECA01170030
113955
Fusobacteriota
>WENV181097140
OECA01002815
246346
Fusobacteriota
TTT
Lys
>WENV181097671
OECA01020046
246346
Fusobacteriota
TTT
Lys
>WENV181097110
OECA01002537
45759
Fusobacteriota
TAA
Leu
>WENV181097349
OECA01006650
200772
Fusobacteriota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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