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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181107138
OEEI01002405
256200
Betaproteobacteria
CGT
Thr
>WENV181106889
OEEI01000583
155690
Betaproteobacteria
TCT
Arg
>WENV181108031
OEEI01062716
97609
Betaproteobacteria
CAA
Leu
>WENV181107169
OEEI01002792
17412
Betaproteobacteria
GGA
Ser
>WENV181108226
OEEI01153789
412167
Betaproteobacteria
GCA
Cys
>WENV181108171
OEEI01117667
178702
Betaproteobacteria
CAT
Met
>WENV181107771
OEEI01021703
58732
Betaproteobacteria
CAG
Leu
>WENV181106846
OEEI01000400
62536
Betaproteobacteria
CAG
Leu
>WENV181107456
OEEI01007995
62536
Betaproteobacteria
CAG
Leu
>WENV181108095
OEEI01085700
412095
Betaproteobacteria
GCA
Cys
>WENV181106876
OEEI01000525
235250
Betaproteobacteria
>WENV181106877
OEEI01000525
235250
Betaproteobacteria
>WENV181106878
OEEI01000525
235250
Betaproteobacteria
>WENV181107563
OEEI01011796
235250
Betaproteobacteria
>WENV181107251
OEEI01003895
95890
Betaproteobacteria
CAA
Leu
>WENV181107280
OEEI01004161
95890
Betaproteobacteria
CAA
Leu
>WENV181107102
OEEI01002080
149294
Betaproteobacteria
TCT
Arg
>WENV181107290
OEEI01004458
240188
Betaproteobacteria
GAA
Phe
>WENV181107312
OEEI01004937
240188
Betaproteobacteria
GAA
Phe
>WENV181107453
OEEI01007957
155338
Betaproteobacteria
>WENV181108082
OEEI01080792
155338
Betaproteobacteria
>WENV181108257
OEEI01169262
155338
Betaproteobacteria
>WENV181107225
OEEI01003527
352197
Betaproteobacteria
GGT
Thr
>WENV181107424
OEEI01007265
358597
Betaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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