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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
79 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181128885
OEFX01000463
243647
Bacillota
TTT
Lys
>WENV181129207
OEFX01008509
243647
Bacillota
TTT
Lys
>WENV181129745
OEFX01121028
243647
Bacillota
TTT
Lys
>WENV181128811
OEFX01000263
178679
Bacillota
CAT
Met
>WENV181128715
OEFX01000066
16842
Bacillota
CGA
Ser
>WENV181128805
OEFX01000248
16842
Bacillota
CGA
Ser
>WENV181129409
OEFX01020433
37213
Bacillota
TGA
Ser
>WENV181128916
OEFX01000707
267649
Bacillota
TAC
Val
>WENV181129132
OEFX01005204
267649
Bacillota
TAC
Val
>WENV181129521
OEFX01033987
267649
Bacillota
TAC
Val
>WENV181129432
OEFX01022452
267556
Bacillota
TAC
Val
>WENV181129708
OEFX01092570
267556
Bacillota
TAC
Val
>WENV181129493
OEFX01030360
243119
Bacillota
CTT
Lys
>WENV181129700
OEFX01090140
235150
Bacillota
TGC
Ala
>WENV181129219
OEFX01009172
235137
Bacillota
TGC
Ala
>WENV181129628
OEFX01057182
241761
Bacillota
TAC
Val
>WENV181128732
OEFX01000085
16834
Bacillota
GCT
Ser
>WENV181128894
OEFX01000531
16834
Bacillota
GCT
Ser
>WENV181128960
OEFX01001144
243646
Bacillota
GTT
Asn
>WENV181129472
OEFX01026664
243646
Bacillota
GTT
Asn
>WENV181129744
OEFX01121028
243646
Bacillota
GTT
Asn
>WENV181128657
OEFX01000016
114002
Bacillota
CAA
Leu
>WENV181129101
OEFX01004299
114002
Bacillota
CAA
Leu
>WENV181128655
OEFX01000011
37437
Bacillota
TAA
Leu
>WENV181129762
OEFX01131776
37437
Bacillota
TAA
Leu
>WENV181128735
OEFX01000101
296878
Bacillota
GTT
Asn
>WENV181128884
OEFX01000463
296878
Bacillota
GTT
Asn
>WENV181129663
OEFX01072438
340265
Bacillota
GCC
Gly
>WENV181129501
OEFX01030492
162028
Bacillota
ACG
Arg
>WENV181128796
OEFX01000237
113951
Bacillota
GTA
Tyr
>WENV181128817
OEFX01000263
113951
Bacillota
GTA
Tyr
>WENV181128737
OEFX01000101
243612
Bacillota
TAC
Val
>WENV181128887
OEFX01000463
243612
Bacillota
TAC
Val
>WENV181129769
OEFX01133477
243612
Bacillota
TAC
Val
>WENV181129725
OEFX01103950
199366
Bacillota
CAT
Met
>WENV181129377
OEFX01018109
155089
Bacillota
CAT
Met
>WENV181129538
OEFX01037543
147135
Bacillota
ACG
Arg
>WENV181129520
OEFX01033987
144599
Bacillota
GTC
Asp
>WENV181128697
OEFX01000057
242848
Bacillota
GAA
Phe
>WENV181128815
OEFX01000263
242848
Bacillota
GAA
Phe
>WENV181128661
OEFX01000020
342895
Bacillota
CAT
Met
>WENV181129566
OEFX01044098
342895
Bacillota
CAT
Met
>WENV181128712
OEFX01000066
194150
Bacillota
TGG
Pro
>WENV181129281
OEFX01013218
185292
Bacillota
ACG
Arg
>WENV181128743
OEFX01000122
250349
Bacillota
GAA
Phe
>WENV181128948
OEFX01001074
250349
Bacillota
GAA
Phe
>WENV181128871
OEFX01000392
145057
Bacillota
TGG
Pro
>WENV181129201
OEFX01008464
235701
Bacillota
TTT
Lys
>WENV181129783
OEFX01141127
237846
Bacillota
GCC
Gly
>WENV181128673
OEFX01000043
235197
Bacillota
GTC
Asp
>WENV181128733
OEFX01000092
235197
Bacillota
GTC
Asp
>WENV181128742
OEFX01000122
235197
Bacillota
GTC
Asp
>WENV181128653
OEFX01000011
368876
Bacillota
GCC
Gly
>WENV181128883
OEFX01000463
368876
Bacillota
GCC
Gly
>WENV181128888
OEFX01000463
368876
Bacillota
GCC
Gly
>WENV181128959
OEFX01001144
368876
Bacillota
GCC
Gly
>WENV181129407
OEFX01020341
152051
Bacillota
ACG
Arg
>WENV181129667
OEFX01073842
84171
Bacillota
GAG
Leu
>WENV181129387
OEFX01018969
355179
Bacillota
TTG
Gln
>WENV181129627
OEFX01057182
241526
Bacillota
CTT
Lys
>WENV181129205
OEFX01008509
243613
Bacillota
GTG
His
>WENV181129199
OEFX01008464
243613
Bacillota
GTG
His
>WENV181129444
OEFX01024032
144672
Bacillota
TCT
Arg
>WENV181128798
OEFX01000237
256920
Bacillota
TTT
Lys
>WENV181129497
OEFX01030492
256920
Bacillota
TTT
Lys
>WENV181129234
OEFX01009836
152491
Bacillota
CAT
Met
>WENV181129664
OEFX01072902
241638
Bacillota
GTG
His
>WENV181129508
OEFX01031284
194064
Bacillota
GAT
Ile
>WENV181128913
OEFX01000680
273029
Bacillota
TGT
Thr
>WENV181129233
OEFX01009836
281472
Bacillota
GGT
Thr
>WENV181128714
OEFX01000066
178024
Bacillota
TCT
Arg
>WENV181128783
OEFX01000193
413657
Bacillota
CCC
Gly
>WENV181128976
OEFX01001520
272488
Bacillota
GAA
Phe
>WENV181129247
OEFX01010826
238945
Bacillota
GCC
Gly
>WENV181129285
OEFX01013459
238945
Bacillota
GCC
Gly
>WENV181129772
OEFX01135554
287034
Bacillota
GTT
Asn
>WENV181129200
OEFX01008464
343027
Bacillota
TTG
Gln
>WENV181129206
OEFX01008509
343027
Bacillota
TTG
Gln
>WENV181128718
OEFX01000076
151836
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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