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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181138894
OEGN01001355
48052
Fusobacteriota
TAA
Leu
>WENV181139477
OEGN01011005
48052
Fusobacteriota
TAA
Leu
>WENV181140057
OEGN01053344
48052
Fusobacteriota
TAA
Leu
>WENV181139177
OEGN01003805
159267
Fusobacteriota
CAT
Met
>WENV181140505
OEGN01205185
242888
Fusobacteriota
GTT
Asn
>WENV181140475
OEGN01194935
151858
Fusobacteriota
GAT
Ile
>WENV181138941
OEGN01001748
151860
Fusobacteriota
ACG
Arg
>WENV181139739
OEGN01021710
151857
Fusobacteriota
TCT
Arg
>WENV181139166
OEGN01003805
156827
Fusobacteriota
GTC
Asp
>WENV181139173
OEGN01003805
156827
Fusobacteriota
GTC
Asp
>WENV181139175
OEGN01003805
115931
Fusobacteriota
TAG
Leu
>WENV181140380
OEGN01136088
115931
Fusobacteriota
TAG
Leu
>WENV181140455
OEGN01176589
152483
Fusobacteriota
GTC
Asp
>WENV181138543
OEGN01000144
152483
Fusobacteriota
GTC
Asp
>WENV181138774
OEGN01000670
152483
Fusobacteriota
GTC
Asp
>WENV181139500
OEGN01011960
152483
Fusobacteriota
GTC
Asp
>WENV181140020
OEGN01048066
152483
Fusobacteriota
GTC
Asp
>WENV181140108
OEGN01059278
152483
Fusobacteriota
GTC
Asp
>WENV181140111
OEGN01059377
152483
Fusobacteriota
GTC
Asp
>WENV181140495
OEGN01200835
152483
Fusobacteriota
GTC
Asp
>WENV181140491
OEGN01199047
246241
Fusobacteriota
TGC
Ala
>WENV181139046
OEGN01002551
248600
Fusobacteriota
GTG
His
>WENV181140233
OEGN01085003
248600
Fusobacteriota
GTG
His
>WENV181140428
OEGN01160689
248600
Fusobacteriota
GTG
His
>WENV181138622
OEGN01000286
343015
Fusobacteriota
TTG
Gln
>WENV181139151
OEGN01003533
343015
Fusobacteriota
TTG
Gln
>WENV181139569
OEGN01013800
343015
Fusobacteriota
TTG
Gln
>WENV181139639
OEGN01016726
343015
Fusobacteriota
TTG
Gln
>WENV181139174
OEGN01003805
242889
Fusobacteriota
TGT
Thr
>WENV181139258
OEGN01004779
242889
Fusobacteriota
TGT
Thr
>WENV181138942
OEGN01001748
60218
Fusobacteriota
CAA
Leu
>WENV181139170
OEGN01003805
242891
Fusobacteriota
CTT
Lys
>WENV181139176
OEGN01003805
151855
Fusobacteriota
TGC
Ala
>WENV181139047
OEGN01002551
243606
Fusobacteriota
TTT
Lys
>WENV181140234
OEGN01085003
243606
Fusobacteriota
TTT
Lys
>WENV181140399
OEGN01146857
243606
Fusobacteriota
TTT
Lys
>WENV181140429
OEGN01160689
243606
Fusobacteriota
TTT
Lys
>WENV181139894
OEGN01033621
152485
Fusobacteriota
TCT
Arg
>WENV181139740
OEGN01021710
127801
Fusobacteriota
CAT
Met
>WENV181138773
OEGN01000670
243607
Fusobacteriota
TAC
Val
>WENV181140107
OEGN01059278
243607
Fusobacteriota
TAC
Val
>WENV181140110
OEGN01059377
243607
Fusobacteriota
TAC
Val
>WENV181139222
OEGN01004370
154976
Fusobacteriota
TCG
Arg
>WENV181139169
OEGN01003805
267548
Fusobacteriota
TCC
Gly
>WENV181139737
OEGN01021710
267548
Fusobacteriota
TCC
Gly
>WENV181140225
OEGN01083305
267548
Fusobacteriota
TCC
Gly
>WENV181140476
OEGN01194945
242887
Fusobacteriota
GTG
His
>WENV181139178
OEGN01003805
151854
Fusobacteriota
TGG
Pro
>WENV181140224
OEGN01083305
151854
Fusobacteriota
TGG
Pro
>WENV181139738
OEGN01021710
248546
Fusobacteriota
TTT
Lys
>WENV181140379
OEGN01136088
248546
Fusobacteriota
TTT
Lys
>WENV181139168
OEGN01003805
415120
Fusobacteriota
GCA
Cys
>WENV181138962
OEGN01001891
37553
Fusobacteriota
GCT
Ser
>WENV181140460
OEGN01180163
113955
Fusobacteriota
>WENV181139217
OEGN01004285
246346
Fusobacteriota
TTT
Lys
>WENV181139893
OEGN01033621
246346
Fusobacteriota
TTT
Lys
>WENV181139735
OEGN01021710
45759
Fusobacteriota
TAA
Leu
>WENV181139171
OEGN01003805
346237
Fusobacteriota
TTC
Glu
>WENV181139259
OEGN01004779
346237
Fusobacteriota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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