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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181175630
OEJQ01011335
342772
Actinomycetota
CTG
Gln
>WENV181176019
OEJQ01123861
340959
Actinomycetota
GTT
Asn
>WENV181176044
OEJQ01138359
10569
Actinomycetota
GCT
Ser
>WENV181175284
OEJQ01000106
418439
Actinomycetota
TCC
Gly
>WENV181175654
OEJQ01014542
418439
Actinomycetota
TCC
Gly
>WENV181175634
OEJQ01011910
161605
Actinomycetota
CAT
Met
>WENV181176041
OEJQ01137236
254819
Actinomycetota
CTC
Glu
>WENV181175715
OEJQ01021708
150473
Actinomycetota
CTC
Glu
>WENV181175896
OEJQ01063160
149271
Actinomycetota
CAT
Met
>WENV181175617
OEJQ01010125
239204
Actinomycetota
CTT
Lys
>WENV181175590
OEJQ01008574
148467
Actinomycetota
CAT
Met
>WENV181175644
OEJQ01013189
246299
Actinomycetota
CTT
Lys
>WENV181175949
OEJQ01081135
246299
Actinomycetota
CTT
Lys
>WENV181175323
OEJQ01000284
235388
Actinomycetota
GTG
His
>WENV181175517
OEJQ01004365
235388
Actinomycetota
GTG
His
>WENV181175744
OEJQ01027395
45767
Actinomycetota
GGA
Ser
>WENV181175869
OEJQ01056483
162402
Actinomycetota
GGG
Pro
>WENV181175598
OEJQ01009257
246365
Actinomycetota
ACG
Arg
>WENV181175386
OEJQ01001137
97120
Actinomycetota
GTA
Tyr
>WENV181175286
OEJQ01000119
235575
Actinomycetota
CTC
Glu
>WENV181175513
OEJQ01004147
235575
Actinomycetota
CTC
Glu
>WENV181175607
OEJQ01009449
235575
Actinomycetota
CTC
Glu
>WENV181175526
OEJQ01005068
417269
Actinomycetota
CCC
Gly
>WENV181175593
OEJQ01008902
236216
Actinomycetota
GGC
Ala
>WENV181176027
OEJQ01127170
344380
Actinomycetota
GAC
Val
>WENV181175618
OEJQ01010125
95601
Actinomycetota
TAG
Leu
>WENV181175672
OEJQ01016365
95601
Actinomycetota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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