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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181188397
OEOE01117587
155663
Alphaproteobacteria
CCG
Arg
>WENV181188631
OEOE01239789
248021
Alphaproteobacteria
CTT
Lys
>WENV181188238
OEOE01054393
303708
Alphaproteobacteria
TGC
Ala
>WENV181188373
OEOE01103904
253273
Alphaproteobacteria
CTT
Lys
>WENV181188880
OEOE01443257
159476
Alphaproteobacteria
ACG
Arg
>WENV181188765
OEOE01351736
426273
Alphaproteobacteria
GCA
Cys
>WENV181188979
OEOE01542848
352191
Alphaproteobacteria
GGT
Thr
>WENV181188329
OEOE01087264
146852
Alphaproteobacteria
GTC
Asp
>WENV181188719
OEOE01308902
180581
Alphaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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