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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181197134
OERA01000099
196621
Bacillota
GTC
Asp
>WENV181197152
OERA01000309
144612
Bacillota
TCT
Arg
>WENV181197181
OERA01001474
144612
Bacillota
TCT
Arg
>WENV181197298
OERA01010294
235134
Bacillota
GAA
Phe
>WENV181197138
OERA01000105
235098
Bacillota
GAC
Val
>WENV181197279
OERA01008048
338152
Bacillota
TTC
Glu
>WENV181197149
OERA01000251
44854
Bacillota
TGA
Ser
>WENV181197136
OERA01000099
304022
Bacillota
GCC
Gly
>WENV181197188
OERA01001486
246023
Bacillota
TGC
Ala
>WENV181197268
OERA01006866
307003
Bacillota
TGC
Ala
>WENV181197238
OERA01004950
429429
Bacillota
CCA
Trp
>WENV181197267
OERA01006860
313454
Bacillota
GAA
Phe
>WENV181197199
OERA01001706
156937
Bacillota
GTG
His
>WENV181197135
OERA01000099
235079
Bacillota
GAA
Phe
>WENV181197120
OERA01000074
338149
Bacillota
CTC
Glu
>WENV181197220
OERA01002726
176449
Bacillota
GTC
Asp
>WENV181197226
OERA01003993
37269
Bacillota
TGA
Ser
>WENV181197278
OERA01008048
287000
Bacillota
GTT
Asn
>WENV181197187
OERA01001486
201704
Bacillota
GAT
Ile
>WENV181197291
OERA01010090
144610
Bacillota
GTG
His
>WENV181197144
OERA01000139
411547
Bacillota
CTG
Gln
>WENV181197167
OERA01000510
411547
Bacillota
CTG
Gln
>WENV181197114
OERA01000052
235095
Bacillota
GGT
Thr
>WENV181197304
OERA01012775
240193
Bacillota
GTG
His
>WENV181197171
OERA01000866
298639
Bacillota
GTT
Asn
>WENV181197217
OERA01002726
298639
Bacillota
GTT
Asn
>WENV181197305
OERA01012775
355179
Bacillota
TTG
Gln
>WENV181197151
OERA01000258
235124
Bacillota
TGG
Pro
>WENV181197130
OERA01000092
144583
Bacillota
ACG
Arg
>WENV181197133
OERA01000099
235171
Bacillota
CCA
Trp
>WENV181197121
OERA01000074
144621
Bacillota
GTT
Asn
>WENV181197166
OERA01000505
58712
Bacillota
CAG
Leu
>WENV181197119
OERA01000071
245296
Bacillota
CCC
Gly
>WENV181197172
OERA01000918
272992
Bacillota
CTT
Lys
>WENV181197159
OERA01000450
178727
Bacillota
GTC
Asp
>WENV181197112
OERA01000045
144594
Bacillota
CAC
Val
>WENV181197307
OERA01012775
45160
Bacillota
CAA
Leu
>WENV181197272
OERA01007095
338131
Bacillota
GCC
Gly
>WENV181197132
OERA01000098
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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