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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181201705
OERP01001113
196621
Bacillota
GTC
Asp
>WENV181201704
OERP01001064
155958
Bacillota
GAT
Ile
>WENV181201803
OERP01009893
237957
Bacillota
GTT
Asn
>WENV181201754
OERP01003473
202812
Bacillota
CAT
Met
>WENV181201657
OERP01000225
144612
Bacillota
TCT
Arg
>WENV181201663
OERP01000271
235098
Bacillota
GAC
Val
>WENV181201764
OERP01003757
44854
Bacillota
TGA
Ser
>WENV181201726
OERP01001763
144577
Bacillota
GAT
Ile
>WENV181201751
OERP01003087
304022
Bacillota
GCC
Gly
>WENV181201799
OERP01009591
347827
Bacillota
TTC
Glu
>WENV181201723
OERP01001660
307003
Bacillota
TGC
Ala
>WENV181201769
OERP01004348
59312
Bacillota
CAG
Leu
>WENV181201750
OERP01003087
235079
Bacillota
GAA
Phe
>WENV181201804
OERP01009893
7070
Bacillota
GGA
Ser
>WENV181201725
OERP01001763
235087
Bacillota
TGC
Ala
>WENV181201708
OERP01001214
413152
Bacillota
TCC
Gly
>WENV181201796
OERP01009136
201704
Bacillota
GAT
Ile
>WENV181201857
OERP01019768
144610
Bacillota
GTG
His
>WENV181201671
OERP01000380
411547
Bacillota
CTG
Gln
>WENV181201679
OERP01000487
235095
Bacillota
GGT
Thr
>WENV181201706
OERP01001113
235095
Bacillota
GGT
Thr
>WENV181201748
OERP01002952
240193
Bacillota
GTG
His
>WENV181201813
OERP01011560
338563
Bacillota
TTG
Gln
>WENV181201718
OERP01001344
235124
Bacillota
TGG
Pro
>WENV181201676
OERP01000452
338129
Bacillota
TGT
Thr
>WENV181201688
OERP01000597
144583
Bacillota
ACG
Arg
>WENV181201806
OERP01010653
419877
Bacillota
TCC
Gly
>WENV181201719
OERP01001467
235171
Bacillota
CCA
Trp
>WENV181201670
OERP01000361
144621
Bacillota
GTT
Asn
>WENV181201702
OERP01001022
58712
Bacillota
CAG
Leu
>WENV181201713
OERP01001241
245296
Bacillota
CCC
Gly
>WENV181201728
OERP01001895
272992
Bacillota
CTT
Lys
>WENV181201733
OERP01002018
198135
Bacillota
GAT
Ile
>WENV181201856
OERP01019768
157635
Bacillota
TCT
Arg
>WENV181201732
OERP01002018
299139
Bacillota
TGC
Ala
>WENV181201682
OERP01000528
144594
Bacillota
CAC
Val
>WENV181201749
OERP01002952
375269
Bacillota
TTG
Gln
>WENV181201715
OERP01001253
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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