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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181217946
OFCL01000757
24650
Bacillota
TAA
Leu
>WENV181217955
OFCL01000835
243647
Bacillota
TTT
Lys
>WENV181218129
OFCL01011005
178679
Bacillota
CAT
Met
>WENV181218087
OFCL01007413
16842
Bacillota
CGA
Ser
>WENV181217765
OFCL01000052
267649
Bacillota
TAC
Val
>WENV181217800
OFCL01000087
267649
Bacillota
TAC
Val
>WENV181217944
OFCL01000757
144668
Bacillota
GTC
Asp
>WENV181218114
OFCL01009632
16834
Bacillota
GCT
Ser
>WENV181217960
OFCL01001055
114002
Bacillota
CAA
Leu
>WENV181218031
OFCL01003102
37437
Bacillota
TAA
Leu
>WENV181218121
OFCL01010753
144766
Bacillota
CAT
Met
>WENV181218111
OFCL01009222
147135
Bacillota
ACG
Arg
>WENV181218133
OFCL01011005
242848
Bacillota
GAA
Phe
>WENV181217935
OFCL01000671
263765
Bacillota
TAC
Val
>WENV181218068
OFCL01005777
342895
Bacillota
CAT
Met
>WENV181217962
OFCL01001115
18852
Bacillota
GCT
Ser
>WENV181217924
OFCL01000600
149248
Bacillota
CAT
Met
>WENV181218027
OFCL01003044
250349
Bacillota
GAA
Phe
>WENV181217880
OFCL01000303
235127
Bacillota
TTT
Lys
>WENV181217966
OFCL01001117
235127
Bacillota
TTT
Lys
>WENV181218026
OFCL01003044
235197
Bacillota
GTC
Asp
>WENV181217963
OFCL01001117
147674
Bacillota
TCT
Arg
>WENV181218123
OFCL01010753
163753
Bacillota
TGG
Pro
>WENV181218118
OFCL01010373
147183
Bacillota
GTT
Asn
>WENV181217953
OFCL01000835
243613
Bacillota
GTG
His
>WENV181218099
OFCL01008578
152491
Bacillota
CAT
Met
>WENV181218095
OFCL01008578
273029
Bacillota
TGT
Thr
>WENV181218098
OFCL01008578
281472
Bacillota
GGT
Thr
>WENV181217954
OFCL01000835
343027
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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