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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181293544
OFHG01007454
366446
Actinomycetota
GCA
Cys
>WENV181293290
OFHG01000981
238933
Actinomycetota
CTT
Lys
>WENV181293583
OFHG01009586
238933
Actinomycetota
CTT
Lys
>WENV181293177
OFHG01000210
169228
Actinomycetota
CAT
Met
>WENV181293340
OFHG01001583
151886
Actinomycetota
CGC
Ala
>WENV181293865
OFHG01033853
151886
Actinomycetota
CGC
Ala
>WENV181293568
OFHG01008523
131548
Actinomycetota
GTC
Asp
>WENV181293274
OFHG01000814
145063
Actinomycetota
CGT
Thr
>WENV181293204
OFHG01000298
152190
Actinomycetota
GAT
Ile
>WENV181293635
OFHG01012079
152190
Actinomycetota
GAT
Ile
>WENV181293390
OFHG01002662
238934
Actinomycetota
CTC
Glu
>WENV181293334
OFHG01001552
338413
Actinomycetota
CCG
Arg
>WENV181293721
OFHG01018063
338413
Actinomycetota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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