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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181299627
OFHM01019019
155958
Bacillota
GAT
Ile
>WENV181299612
OFHM01017903
237957
Bacillota
GTT
Asn
>WENV181299199
OFHM01002602
240192
Bacillota
CTG
Gln
>WENV181299633
OFHM01019730
37213
Bacillota
TGA
Ser
>WENV181299898
OFHM01089944
238816
Bacillota
GAA
Phe
>WENV181299434
OFHM01008079
339890
Bacillota
TTG
Gln
>WENV181298884
OFHM01000275
147487
Bacillota
ACG
Arg
>WENV181299333
OFHM01005912
338152
Bacillota
TTC
Glu
>WENV181299447
OFHM01008362
16567
Bacillota
CGA
Ser
>WENV181299428
OFHM01007714
235154
Bacillota
GTT
Asn
>WENV181298724
OFHM01000052
429443
Bacillota
GCA
Cys
>WENV181298998
OFHM01000579
347827
Bacillota
TTC
Glu
>WENV181299155
OFHM01001778
59312
Bacillota
CAG
Leu
>WENV181299605
OFHM01017558
235150
Bacillota
TGC
Ala
>WENV181299089
OFHM01001066
293599
Bacillota
CTT
Lys
>WENV181298879
OFHM01000275
237265
Bacillota
TAC
Val
>WENV181299277
OFHM01004178
313331
Bacillota
CTC
Glu
>WENV181298909
OFHM01000318
302152
Bacillota
CTT
Lys
>WENV181298941
OFHM01000385
302152
Bacillota
CTT
Lys
>WENV181298942
OFHM01000385
302152
Bacillota
CTT
Lys
>WENV181298868
OFHM01000237
16359
Bacillota
CGA
Ser
>WENV181299856
OFHM01068864
149026
Bacillota
TCT
Arg
>WENV181299459
OFHM01008966
429429
Bacillota
CCA
Trp
>WENV181299615
OFHM01017903
247786
Bacillota
CGT
Thr
>WENV181299802
OFHM01048890
313454
Bacillota
GAA
Phe
>WENV181299519
OFHM01011608
41154
Bacillota
TAA
Leu
>WENV181299350
OFHM01006270
247747
Bacillota
GGT
Thr
>WENV181298913
OFHM01000329
96360
Bacillota
GTA
Tyr
>WENV181299345
OFHM01006210
256115
Bacillota
CGT
Thr
>WENV181299238
OFHM01003589
413152
Bacillota
TCC
Gly
>WENV181298876
OFHM01000269
149024
Bacillota
GGT
Thr
>WENV181299614
OFHM01017903
390525
Bacillota
TTC
Glu
>WENV181298853
OFHM01000198
162445
Bacillota
CAT
Met
>WENV181299554
OFHM01015576
201704
Bacillota
GAT
Ile
>WENV181298880
OFHM01000275
240190
Bacillota
TTT
Lys
>WENV181299002
OFHM01000588
100326
Bacillota
GTA
Tyr
>WENV181299188
OFHM01002350
100326
Bacillota
GTA
Tyr
>WENV181298836
OFHM01000179
147684
Bacillota
ACG
Arg
>WENV181299066
OFHM01000852
147684
Bacillota
ACG
Arg
>WENV181299248
OFHM01003779
147684
Bacillota
ACG
Arg
>WENV181299443
OFHM01008210
147684
Bacillota
ACG
Arg
>WENV181299491
OFHM01010194
147684
Bacillota
ACG
Arg
>WENV181299403
OFHM01007018
239812
Bacillota
CCT
Arg
>WENV181298910
OFHM01000321
18852
Bacillota
GCT
Ser
>WENV181299330
OFHM01005701
235095
Bacillota
GGT
Thr
>WENV181299033
OFHM01000683
185292
Bacillota
ACG
Arg
>WENV181299390
OFHM01006612
339391
Bacillota
TTC
Glu
>WENV181299435
OFHM01008079
235127
Bacillota
TTT
Lys
>WENV181299432
OFHM01008079
147674
Bacillota
TCT
Arg
>WENV181299499
OFHM01010723
241432
Bacillota
TGT
Thr
>WENV181299064
OFHM01000847
147276
Bacillota
CCT
Arg
>WENV181299352
OFHM01006322
157838
Bacillota
GTC
Asp
>WENV181299594
OFHM01017011
419877
Bacillota
TCC
Gly
>WENV181298965
OFHM01000469
238974
Bacillota
GAA
Phe
>WENV181298881
OFHM01000275
247849
Bacillota
TGT
Thr
>WENV181299613
OFHM01017903
3271
Bacillota
GGA
Ser
>WENV181299599
OFHM01017352
299139
Bacillota
TGC
Ala
>WENV181299508
OFHM01011052
414486
Bacillota
CCC
Gly
>WENV181298924
OFHM01000351
272488
Bacillota
GAA
Phe
>WENV181299406
OFHM01007038
45160
Bacillota
CAA
Leu
>WENV181299389
OFHM01006612
7065
Bacillota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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