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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181325453
OFLJ01000891
165001
Bacteroidota
GTT
Asn
>WENV181325942
OFLJ01052745
162266
Bacteroidota
CAT
Met
>WENV181325567
OFLJ01005655
308806
Bacteroidota
TCC
Gly
>WENV181325545
OFLJ01004278
126691
Bacteroidota
TGG
Pro
>WENV181325546
OFLJ01004278
126691
Bacteroidota
TGG
Pro
>WENV181325786
OFLJ01026024
126691
Bacteroidota
TGG
Pro
>WENV181325507
OFLJ01002440
180185
Bacteroidota
TGC
Ala
>WENV181325635
OFLJ01010194
172532
Bacteroidota
GTC
Asp
>WENV181325902
OFLJ01045346
127458
Bacteroidota
GAC
Val
>WENV181325544
OFLJ01004278
60611
Bacteroidota
GCT
Ser
>WENV181325977
OFLJ01060460
60611
Bacteroidota
GCT
Ser
>WENV181325869
OFLJ01037753
161616
Bacteroidota
CAT
Met
>WENV181325873
OFLJ01039812
241347
Bacteroidota
TTG
Gln
>WENV181325727
OFLJ01018432
349438
Bacteroidota
GGT
Thr
>WENV181325654
OFLJ01011761
338568
Bacteroidota
TTC
Glu
>WENV181325566
OFLJ01005655
96418
Bacteroidota
GTA
Tyr
>WENV181325824
OFLJ01030041
369129
Bacteroidota
TTC
Glu
>WENV181325601
OFLJ01007903
45519
Bacteroidota
GGA
Ser
>WENV181325765
OFLJ01023752
45519
Bacteroidota
GGA
Ser
>WENV181325829
OFLJ01031620
150103
Bacteroidota
GTG
His
>WENV181325978
OFLJ01060460
127288
Bacteroidota
TGG
Pro
>WENV181325820
OFLJ01029489
127414
Bacteroidota
TGG
Pro
>WENV181325847
OFLJ01034094
197066
Bacteroidota
GTT
Asn
>WENV181325458
OFLJ01000912
341598
Bacteroidota
GCC
Gly
>WENV181325893
OFLJ01043897
235935
Bacteroidota
TCC
Gly
>WENV181325414
OFLJ01000512
145512
Bacteroidota
CAT
Met
>WENV181325657
OFLJ01011956
126712
Bacteroidota
GAC
Val
>WENV181325459
OFLJ01000912
58832
Bacteroidota
TAA
Leu
>WENV181325979
OFLJ01060460
176463
Bacteroidota
TCT
Arg
>WENV181325787
OFLJ01026024
145408
Bacteroidota
TCT
Arg
>WENV181325647
OFLJ01010802
136274
Bacteroidota
TAC
Val
>WENV181325604
OFLJ01008293
341465
Bacteroidota
TTC
Glu
>WENV181325536
OFLJ01003772
235746
Bacteroidota
GAA
Phe
>WENV181325896
OFLJ01044098
145151
Bacteroidota
TGG
Pro
>WENV181325892
OFLJ01043897
101289
Bacteroidota
GTA
Tyr
>WENV181325959
OFLJ01056536
101289
Bacteroidota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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