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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181336314
OFMD01000283
80961
Euryarchaeota
TAA
Leu
>WENV181336183
OFMD01000088
156426
Euryarchaeota
GCC
Gly
>WENV181336429
OFMD01000667
245362
Euryarchaeota
GTT
Asn
>WENV181336431
OFMD01000667
127135
Euryarchaeota
TTC
Glu
>WENV181336143
OFMD01000050
128076
Euryarchaeota
GAT
Ile
>WENV181336132
OFMD01000041
344301
Euryarchaeota
TTG
Gln
>WENV181336082
OFMD01000010
147565
Euryarchaeota
GTA
Tyr
>WENV181336430
OFMD01000667
147570
Euryarchaeota
CAT
Met
>WENV181336113
OFMD01000025
238275
Euryarchaeota
GAA
Phe
>WENV181336136
OFMD01000045
147563
Euryarchaeota
TCT
Arg
>WENV181336081
OFMD01000010
127134
Euryarchaeota
TGG
Pro
>WENV181336084
OFMD01000010
153995
Euryarchaeota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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