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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181384029
OFRH01008220
339149
Alphaproteobacteria
GTT
Asn
>WENV181383915
OFRH01000798
146864
Alphaproteobacteria
TGG
Pro
>WENV181383979
OFRH01003747
81091
Alphaproteobacteria
GTA
Tyr
>WENV181383970
OFRH01003103
146858
Alphaproteobacteria
TCT
Arg
>WENV181384006
OFRH01005310
339457
Alphaproteobacteria
>WENV181383978
OFRH01003444
412154
Alphaproteobacteria
GCA
Cys
>WENV181384033
OFRH01008662
146854
Alphaproteobacteria
CCT
Arg
>WENV181383955
OFRH01002315
95924
Alphaproteobacteria
GAG
Leu
>WENV181383977
OFRH01003364
59118
Alphaproteobacteria
CAG
Leu
>WENV181383956
OFRH01002334
417658
Alphaproteobacteria
TCC
Gly
>WENV181384030
OFRH01008249
339465
Alphaproteobacteria
GGT
Thr
>WENV181384235
OFRH01040823
237479
Alphaproteobacteria
TTT
Lys
>WENV181384023
OFRH01007707
23611
Alphaproteobacteria
CGA
Ser
>WENV181384133
OFRH01021293
339306
Alphaproteobacteria
>WENV181384027
OFRH01008059
412153
Alphaproteobacteria
CTG
Gln
>WENV181383920
OFRH01000959
339464
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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