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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
70 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181438481
OGDJ01000243
196621
Bacillota
GTC
Asp
>WENV181438818
OGDJ01013601
16842
Bacillota
CGA
Ser
>WENV181438399
OGDJ01000115
309417
Bacillota
GGC
Ala
>WENV181438590
OGDJ01000644
309417
Bacillota
GGC
Ala
>WENV181438408
OGDJ01000130
144612
Bacillota
TCT
Arg
>WENV181438671
OGDJ01001494
235098
Bacillota
GAC
Val
>WENV181438566
OGDJ01000514
338152
Bacillota
TTC
Glu
>WENV181438461
OGDJ01000213
44854
Bacillota
TGA
Ser
>WENV181438482
OGDJ01000243
304022
Bacillota
GCC
Gly
>WENV181438783
OGDJ01007424
429443
Bacillota
GCA
Cys
>WENV181438820
OGDJ01013829
307003
Bacillota
TGC
Ala
>WENV181438837
OGDJ01016104
147639
Bacillota
ACG
Arg
>WENV181438615
OGDJ01000815
59312
Bacillota
CAG
Leu
>WENV181438832
OGDJ01016104
239020
Bacillota
TTT
Lys
>WENV181438345
OGDJ01000035
338147
Bacillota
CTC
Glu
>WENV181438351
OGDJ01000044
338147
Bacillota
CTC
Glu
>WENV181438603
OGDJ01000713
338147
Bacillota
CTC
Glu
>WENV181438869
OGDJ01022414
235150
Bacillota
TGC
Ala
>WENV181438570
OGDJ01000528
10926
Bacillota
CGA
Ser
>WENV181438686
OGDJ01001862
144668
Bacillota
GTC
Asp
>WENV181438515
OGDJ01000315
429429
Bacillota
CCA
Trp
>WENV181438687
OGDJ01001862
41154
Bacillota
TAA
Leu
>WENV181438630
OGDJ01000909
44859
Bacillota
AAG
Leu
>WENV181438398
OGDJ01000115
11034
Bacillota
GGA
Ser
>WENV181438737
OGDJ01004097
243646
Bacillota
GTT
Asn
>WENV181438702
OGDJ01002435
235079
Bacillota
GAA
Phe
>WENV181438836
OGDJ01016104
43886
Bacillota
TAA
Leu
>WENV181438563
OGDJ01000503
338149
Bacillota
CTC
Glu
>WENV181438366
OGDJ01000059
245298
Bacillota
CGG
Pro
>WENV181438727
OGDJ01003786
287000
Bacillota
GTT
Asn
>WENV181438549
OGDJ01000453
169968
Bacillota
CAT
Met
>WENV181438865
OGDJ01020672
162445
Bacillota
CAT
Met
>WENV181438797
OGDJ01008980
152492
Bacillota
GGG
Pro
>WENV181438701
OGDJ01002423
340081
Bacillota
CCG
Arg
>WENV181438543
OGDJ01000432
100326
Bacillota
GTA
Tyr
>WENV181438577
OGDJ01000555
100326
Bacillota
GTA
Tyr
>WENV181438365
OGDJ01000059
411547
Bacillota
CTG
Gln
>WENV181438413
OGDJ01000139
411547
Bacillota
CTG
Gln
>WENV181438812
OGDJ01012571
147684
Bacillota
ACG
Arg
>WENV181438462
OGDJ01000213
4624
Bacillota
GCT
Ser
>WENV181438669
OGDJ01001328
238745
Bacillota
CTT
Lys
>WENV181438455
OGDJ01000207
18852
Bacillota
GCT
Ser
>WENV181438761
OGDJ01005846
235095
Bacillota
GGT
Thr
>WENV181438885
OGDJ01028615
194150
Bacillota
TGG
Pro
>WENV181438849
OGDJ01017899
250349
Bacillota
GAA
Phe
>WENV181438364
OGDJ01000059
411549
Bacillota
TTG
Gln
>WENV181438509
OGDJ01000294
235142
Bacillota
CTT
Lys
>WENV181438495
OGDJ01000266
148188
Bacillota
CCG
Arg
>WENV181438484
OGDJ01000243
80612
Bacillota
GTA
Tyr
>WENV181438446
OGDJ01000184
256380
Bacillota
>WENV181438636
OGDJ01001004
340080
Bacillota
CCT
Arg
>WENV181438848
OGDJ01017899
235197
Bacillota
GTC
Asp
>WENV181438736
OGDJ01004097
368876
Bacillota
GCC
Gly
>WENV181438694
OGDJ01002123
147674
Bacillota
TCT
Arg
>WENV181438361
OGDJ01000052
235124
Bacillota
TGG
Pro
>WENV181438601
OGDJ01000687
338129
Bacillota
TGT
Thr
>WENV181438416
OGDJ01000148
144583
Bacillota
ACG
Arg
>WENV181438480
OGDJ01000243
235171
Bacillota
CCA
Trp
>WENV181438564
OGDJ01000503
144621
Bacillota
GTT
Asn
>WENV181438354
OGDJ01000047
235113
Bacillota
GAA
Phe
>WENV181438733
OGDJ01003982
152491
Bacillota
CAT
Met
>WENV181438559
OGDJ01000487
58712
Bacillota
CAG
Leu
>WENV181438617
OGDJ01000818
245296
Bacillota
CCC
Gly
>WENV181438778
OGDJ01006676
272992
Bacillota
CTT
Lys
>WENV181438732
OGDJ01003982
281472
Bacillota
GGT
Thr
>WENV181438547
OGDJ01000447
144594
Bacillota
CAC
Val
>WENV181438872
OGDJ01023338
413657
Bacillota
CCC
Gly
>WENV181438550
OGDJ01000453
272488
Bacillota
GAA
Phe
>WENV181438569
OGDJ01000528
60249
Bacillota
CAG
Leu
>WENV181438497
OGDJ01000266
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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