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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181534103
OGHS01003340
155958
Bacillota
GAT
Ile
>WENV181533942
OGHS01000571
144612
Bacillota
TCT
Arg
>WENV181534060
OGHS01002208
144612
Bacillota
TCT
Arg
>WENV181533889
OGHS01000368
235098
Bacillota
GAC
Val
>WENV181534026
OGHS01001528
235098
Bacillota
GAC
Val
>WENV181533959
OGHS01000738
44854
Bacillota
TGA
Ser
>WENV181534138
OGHS01004624
235154
Bacillota
GTT
Asn
>WENV181534037
OGHS01001685
59312
Bacillota
CAG
Leu
>WENV181534188
OGHS01008136
235150
Bacillota
TGC
Ala
>WENV181533794
OGHS01000084
421322
Bacillota
TCC
Gly
>WENV181534030
OGHS01001593
11034
Bacillota
GGA
Ser
>WENV181534258
OGHS01016871
235079
Bacillota
GAA
Phe
>WENV181534035
OGHS01001664
245298
Bacillota
CGG
Pro
>WENV181533988
OGHS01000935
169968
Bacillota
CAT
Met
>WENV181533903
OGHS01000441
235078
Bacillota
TAC
Val
>WENV181533931
OGHS01000536
100326
Bacillota
GTA
Tyr
>WENV181533981
OGHS01000897
144610
Bacillota
GTG
His
>WENV181533906
OGHS01000441
240017
Bacillota
GCC
Gly
>WENV181534006
OGHS01001223
411547
Bacillota
CTG
Gln
>WENV181534034
OGHS01001664
411547
Bacillota
CTG
Gln
>WENV181534109
OGHS01003477
411547
Bacillota
CTG
Gln
>WENV181534311
OGHS01029831
411547
Bacillota
CTG
Gln
>WENV181533960
OGHS01000738
4624
Bacillota
GCT
Ser
>WENV181533832
OGHS01000180
18852
Bacillota
GCT
Ser
>WENV181533923
OGHS01000503
235095
Bacillota
GGT
Thr
>WENV181534102
OGHS01003298
235095
Bacillota
GGT
Thr
>WENV181534113
OGHS01003644
235095
Bacillota
GGT
Thr
>WENV181533875
OGHS01000308
411549
Bacillota
TTG
Gln
>WENV181534203
OGHS01009338
245386
Bacillota
CCA
Trp
>WENV181534062
OGHS01002228
148188
Bacillota
CCG
Arg
>WENV181534056
OGHS01002153
80612
Bacillota
GTA
Tyr
>WENV181534104
OGHS01003341
256380
Bacillota
>WENV181534027
OGHS01001545
235124
Bacillota
TGG
Pro
>WENV181533990
OGHS01000955
338129
Bacillota
TGT
Thr
>WENV181534047
OGHS01001930
338129
Bacillota
TGT
Thr
>WENV181533991
OGHS01000964
157838
Bacillota
GTC
Asp
>WENV181533921
OGHS01000503
235171
Bacillota
CCA
Trp
>WENV181534273
OGHS01019758
235171
Bacillota
CCA
Trp
>WENV181533978
OGHS01000897
238974
Bacillota
GAA
Phe
>WENV181534264
OGHS01018667
144621
Bacillota
GTT
Asn
>WENV181534198
OGHS01008773
243098
Bacillota
GGT
Thr
>WENV181534046
OGHS01001865
58712
Bacillota
CAG
Leu
>WENV181534052
OGHS01002072
245296
Bacillota
CCC
Gly
>WENV181534058
OGHS01002172
144594
Bacillota
CAC
Val
>WENV181534121
OGHS01003892
338127
Bacillota
TTG
Gln
>WENV181534082
OGHS01002736
414486
Bacillota
CCC
Gly
>WENV181533989
OGHS01000935
272488
Bacillota
GAA
Phe
>WENV181534011
OGHS01001329
114075
Bacillota
TAG
Leu
>WENV181534259
OGHS01016871
249259
Bacillota
GCC
Gly
>WENV181534219
OGHS01011933
338128
Bacillota
TTC
Glu
>WENV181534243
OGHS01014291
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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