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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
131 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181567253
OGJJ01002767
24650
Bacillota
TAA
Leu
>WENV181567033
OGJJ01000899
243647
Bacillota
TTT
Lys
>WENV181567690
OGJJ01029826
163776
Bacillota
TGG
Pro
>WENV181567440
OGJJ01005487
16842
Bacillota
CGA
Ser
>WENV181567108
OGJJ01001457
144612
Bacillota
TCT
Arg
>WENV181567142
OGJJ01001734
144612
Bacillota
TCT
Arg
>WENV181567270
OGJJ01002942
144612
Bacillota
TCT
Arg
>WENV181567304
OGJJ01003215
144612
Bacillota
TCT
Arg
>WENV181567431
OGJJ01005312
144612
Bacillota
TCT
Arg
>WENV181567626
OGJJ01017053
235693
Bacillota
GGT
Thr
>WENV181567091
OGJJ01001287
235098
Bacillota
GAC
Val
>WENV181567224
OGJJ01002515
235098
Bacillota
GAC
Val
>WENV181567322
OGJJ01003609
235098
Bacillota
GAC
Val
>WENV181567328
OGJJ01003634
338152
Bacillota
TTC
Glu
>WENV181567123
OGJJ01001553
44854
Bacillota
TGA
Ser
>WENV181567136
OGJJ01001710
44854
Bacillota
TGA
Ser
>WENV181567531
OGJJ01009778
59312
Bacillota
CAG
Leu
>WENV181567093
OGJJ01001330
238910
Bacillota
CTT
Lys
>WENV181566678
OGJJ01000057
338147
Bacillota
CTC
Glu
>WENV181566935
OGJJ01000529
338147
Bacillota
CTC
Glu
>WENV181567223
OGJJ01002511
338147
Bacillota
CTC
Glu
>WENV181567252
OGJJ01002766
338147
Bacillota
CTC
Glu
>WENV181567631
OGJJ01017851
155273
Bacillota
CAT
Met
>WENV181567709
OGJJ01035865
235137
Bacillota
TGC
Ala
>WENV181567592
OGJJ01013371
235294
Bacillota
TGC
Ala
>WENV181566842
OGJJ01000317
340802
Bacillota
TTG
Gln
>WENV181567525
OGJJ01009283
338143
Bacillota
CTC
Glu
>WENV181567148
OGJJ01001757
419288
Bacillota
GGT
Thr
>WENV181567556
OGJJ01011522
339803
Bacillota
TTG
Gln
>WENV181567195
OGJJ01002186
235091
Bacillota
CTT
Lys
>WENV181567530
OGJJ01009778
44859
Bacillota
AAG
Leu
>WENV181567587
OGJJ01013222
44859
Bacillota
AAG
Leu
>WENV181567629
OGJJ01017295
16834
Bacillota
GCT
Ser
>WENV181567139
OGJJ01001716
11034
Bacillota
GGA
Ser
>WENV181567168
OGJJ01001911
11034
Bacillota
GGA
Ser
>WENV181567276
OGJJ01003016
11034
Bacillota
GGA
Ser
>WENV181567535
OGJJ01010134
11034
Bacillota
GGA
Ser
>WENV181567650
OGJJ01020300
247057
Bacillota
TGC
Ala
>WENV181567110
OGJJ01001468
114002
Bacillota
CAA
Leu
>WENV181566998
OGJJ01000739
16266
Bacillota
GCT
Ser
>WENV181567035
OGJJ01000899
243612
Bacillota
TAC
Val
>WENV181567475
OGJJ01006782
338149
Bacillota
CTC
Glu
>WENV181567490
OGJJ01007358
338149
Bacillota
CTC
Glu
>WENV181567520
OGJJ01008935
338149
Bacillota
CTC
Glu
>WENV181567526
OGJJ01009416
338149
Bacillota
CTC
Glu
>WENV181567611
OGJJ01015219
338149
Bacillota
CTC
Glu
>WENV181567504
OGJJ01007953
245298
Bacillota
CGG
Pro
>WENV181567571
OGJJ01012153
245298
Bacillota
CGG
Pro
>WENV181566966
OGJJ01000641
37269
Bacillota
TGA
Ser
>WENV181566628
OGJJ01000028
155089
Bacillota
CAT
Met
>WENV181567663
OGJJ01022797
413152
Bacillota
TCC
Gly
>WENV181566963
OGJJ01000631
162445
Bacillota
CAT
Met
>WENV181566807
OGJJ01000257
152492
Bacillota
GGG
Pro
>WENV181567324
OGJJ01003614
147135
Bacillota
ACG
Arg
>WENV181566984
OGJJ01000693
100326
Bacillota
GTA
Tyr
>WENV181566841
OGJJ01000317
144610
Bacillota
GTG
His
>WENV181566899
OGJJ01000454
411547
Bacillota
CTG
Gln
>WENV181566950
OGJJ01000579
411547
Bacillota
CTG
Gln
>WENV181567074
OGJJ01001148
411547
Bacillota
CTG
Gln
>WENV181567503
OGJJ01007953
411547
Bacillota
CTG
Gln
>WENV181567570
OGJJ01012153
411547
Bacillota
CTG
Gln
>WENV181567097
OGJJ01001390
147684
Bacillota
ACG
Arg
>WENV181567180
OGJJ01002044
147684
Bacillota
ACG
Arg
>WENV181567124
OGJJ01001553
4624
Bacillota
GCT
Ser
>WENV181567137
OGJJ01001710
4624
Bacillota
GCT
Ser
>WENV181567146
OGJJ01001742
342895
Bacillota
CAT
Met
>WENV181567522
OGJJ01009018
342895
Bacillota
CAT
Met
>WENV181567079
OGJJ01001187
412387
Bacillota
GCA
Cys
>WENV181567121
OGJJ01001521
235095
Bacillota
GGT
Thr
>WENV181567300
OGJJ01003191
235095
Bacillota
GGT
Thr
>WENV181567332
OGJJ01003686
235095
Bacillota
GGT
Thr
>WENV181567029
OGJJ01000883
250349
Bacillota
GAA
Phe
>WENV181566959
OGJJ01000619
411549
Bacillota
TTG
Gln
>WENV181567231
OGJJ01002559
411549
Bacillota
TTG
Gln
>WENV181567330
OGJJ01003684
411549
Bacillota
TTG
Gln
>WENV181567599
OGJJ01013870
411549
Bacillota
TTG
Gln
>WENV181567099
OGJJ01001414
235142
Bacillota
CTT
Lys
>WENV181567215
OGJJ01002418
148188
Bacillota
CCG
Arg
>WENV181567274
OGJJ01002973
148188
Bacillota
CCG
Arg
>WENV181567346
OGJJ01003981
148188
Bacillota
CCG
Arg
>WENV181567380
OGJJ01004503
148188
Bacillota
CCG
Arg
>WENV181567580
OGJJ01012771
148188
Bacillota
CCG
Arg
>WENV181567028
OGJJ01000883
235197
Bacillota
GTC
Asp
>WENV181567181
OGJJ01002048
235124
Bacillota
TGG
Pro
>WENV181567198
OGJJ01002229
235124
Bacillota
TGG
Pro
>WENV181567375
OGJJ01004438
235124
Bacillota
TGG
Pro
>WENV181567399
OGJJ01004900
235124
Bacillota
TGG
Pro
>WENV181567519
OGJJ01008903
235124
Bacillota
TGG
Pro
>WENV181567786
OGJJ01067432
342936
Bacillota
CCT
Arg
>WENV181567150
OGJJ01001776
338129
Bacillota
TGT
Thr
>WENV181567498
OGJJ01007684
338129
Bacillota
TGT
Thr
>WENV181567591
OGJJ01013358
338129
Bacillota
TGT
Thr
>WENV181566585
OGJJ01000004
157838
Bacillota
GTC
Asp
>WENV181567646
OGJJ01019836
243613
Bacillota
GTG
His
>WENV181567102
OGJJ01001431
144583
Bacillota
ACG
Arg
>WENV181567119
OGJJ01001521
235171
Bacillota
CCA
Trp
>WENV181567298
OGJJ01003191
235171
Bacillota
CCA
Trp
>WENV181567077
OGJJ01001163
144621
Bacillota
GTT
Asn
>WENV181567245
OGJJ01002708
144621
Bacillota
GTT
Asn
>WENV181567336
OGJJ01003759
144621
Bacillota
GTT
Asn
>WENV181567450
OGJJ01005874
144621
Bacillota
GTT
Asn
>WENV181567476
OGJJ01006782
144621
Bacillota
GTT
Asn
>WENV181567491
OGJJ01007358
144621
Bacillota
GTT
Asn
>WENV181567521
OGJJ01008935
144621
Bacillota
GTT
Asn
>WENV181567527
OGJJ01009416
144621
Bacillota
GTT
Asn
>WENV181567612
OGJJ01015219
144621
Bacillota
GTT
Asn
>WENV181567447
OGJJ01005687
235113
Bacillota
GAA
Phe
>WENV181567559
OGJJ01011694
148495
Bacillota
TCT
Arg
>WENV181567627
OGJJ01017053
152491
Bacillota
CAT
Met
>WENV181566979
OGJJ01000690
58712
Bacillota
CAG
Leu
>WENV181567053
OGJJ01000962
58712
Bacillota
CAG
Leu
>WENV181567207
OGJJ01002344
58712
Bacillota
CAG
Leu
>WENV181567101
OGJJ01001430
245296
Bacillota
CCC
Gly
>WENV181567347
OGJJ01004011
245296
Bacillota
CCC
Gly
>WENV181567643
OGJJ01019666
59664
Bacillota
CAG
Leu
>WENV181566840
OGJJ01000317
157635
Bacillota
TCT
Arg
>WENV181567138
OGJJ01001712
144594
Bacillota
CAC
Val
>WENV181567199
OGJJ01002241
144594
Bacillota
CAC
Val
>WENV181567401
OGJJ01004913
95563
Bacillota
GTA
Tyr
>WENV181567080
OGJJ01001193
413657
Bacillota
CCC
Gly
>WENV181567712
OGJJ01037488
114075
Bacillota
TAG
Leu
>WENV181567495
OGJJ01007405
119513
Bacillota
CAA
Leu
>WENV181566716
OGJJ01000093
238945
Bacillota
GCC
Gly
>WENV181566833
OGJJ01000296
238945
Bacillota
GCC
Gly
>WENV181566937
OGJJ01000534
238945
Bacillota
GCC
Gly
>WENV181567647
OGJJ01019836
343027
Bacillota
TTG
Gln
>WENV181566973
OGJJ01000657
338131
Bacillota
GCC
Gly
>WENV181566971
OGJJ01000650
338128
Bacillota
TTC
Glu
>WENV181567268
OGJJ01002891
338128
Bacillota
TTC
Glu
>WENV181567379
OGJJ01004489
338128
Bacillota
TTC
Glu
>WENV181567693
OGJJ01030262
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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