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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181578813
OGJY01005835
144620
Thermodesulfobacteriota
GGG
Pro
>WENV181578814
OGJY01005835
144620
Thermodesulfobacteriota
GGG
Pro
>WENV181578012
OGJY01000194
254781
Thermodesulfobacteriota
GAA
Phe
>WENV181577970
OGJY01000145
156932
Thermodesulfobacteriota
ACG
Arg
>WENV181578491
OGJY01001783
156932
Thermodesulfobacteriota
ACG
Arg
>WENV181578517
OGJY01002027
156932
Thermodesulfobacteriota
ACG
Arg
>WENV181578655
OGJY01003207
156932
Thermodesulfobacteriota
ACG
Arg
>WENV181578361
OGJY01001087
345926
Thermodesulfobacteriota
CTG
Gln
>WENV181578129
OGJY01000406
151846
Thermodesulfobacteriota
CCA
Trp
>WENV181578017
OGJY01000199
248694
Thermodesulfobacteriota
CAT
Met
>WENV181578352
OGJY01001049
3467
Thermodesulfobacteriota
CGA
Ser
>WENV181578128
OGJY01000406
266268
Thermodesulfobacteriota
TCC
Gly
>WENV181578490
OGJY01001783
128663
Thermodesulfobacteriota
CGG
Pro
>WENV181577966
OGJY01000139
156452
Thermodesulfobacteriota
TTC
Glu
>WENV181578345
OGJY01001028
156452
Thermodesulfobacteriota
TTC
Glu
>WENV181578362
OGJY01001087
156452
Thermodesulfobacteriota
TTC
Glu
>WENV181577969
OGJY01000145
248567
Thermodesulfobacteriota
CTT
Lys
>WENV181578101
OGJY01000345
3406
Thermodesulfobacteriota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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