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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181610120
OGLP01001134
196621
Bacillota
GTC
Asp
>WENV181610178
OGLP01003203
155958
Bacillota
GAT
Ile
>WENV181610127
OGLP01001206
309417
Bacillota
GGC
Ala
>WENV181610184
OGLP01003610
309417
Bacillota
GGC
Ala
>WENV181610214
OGLP01006577
144612
Bacillota
TCT
Arg
>WENV181610143
OGLP01001502
235098
Bacillota
GAC
Val
>WENV181610149
OGLP01001762
44854
Bacillota
TGA
Ser
>WENV181610196
OGLP01004251
304022
Bacillota
GCC
Gly
>WENV181610211
OGLP01006043
338147
Bacillota
CTC
Glu
>WENV181610226
OGLP01008732
44859
Bacillota
AAG
Leu
>WENV181610163
OGLP01002259
11034
Bacillota
GGA
Ser
>WENV181610103
OGLP01000839
338149
Bacillota
CTC
Glu
>WENV181610199
OGLP01004514
245298
Bacillota
CGG
Pro
>WENV181610185
OGLP01003702
411547
Bacillota
CTG
Gln
>WENV181610198
OGLP01004514
411547
Bacillota
CTG
Gln
>WENV181610154
OGLP01001880
157156
Bacillota
TCT
Arg
>WENV181610150
OGLP01001762
4624
Bacillota
GCT
Ser
>WENV181610121
OGLP01001134
235095
Bacillota
GGT
Thr
>WENV181610206
OGLP01005276
411549
Bacillota
TTG
Gln
>WENV181610216
OGLP01006665
235142
Bacillota
CTT
Lys
>WENV181610145
OGLP01001594
148188
Bacillota
CCG
Arg
>WENV181610230
OGLP01009340
338129
Bacillota
TGT
Thr
>WENV181610079
OGLP01000644
144583
Bacillota
ACG
Arg
>WENV181610208
OGLP01005717
247734
Bacillota
TGC
Ala
>WENV181610119
OGLP01001134
235171
Bacillota
CCA
Trp
>WENV181610256
OGLP01015769
238974
Bacillota
GAA
Phe
>WENV181610104
OGLP01000839
144621
Bacillota
GTT
Asn
>WENV181610107
OGLP01000859
58712
Bacillota
CAG
Leu
>WENV181610191
OGLP01004004
245296
Bacillota
CCC
Gly
>WENV181610241
OGLP01011526
272992
Bacillota
CTT
Lys
>WENV181610201
OGLP01004578
144594
Bacillota
CAC
Val
>WENV181610259
OGLP01016587
414486
Bacillota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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