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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181618513
OGMC01001269
144612
Bacillota
TCT
Arg
>WENV181618441
OGMC01000573
267649
Bacillota
TAC
Val
>WENV181618731
OGMC01007028
235098
Bacillota
GAC
Val
>WENV181618660
OGMC01004089
148239
Bacillota
TCT
Arg
>WENV181618470
OGMC01000897
44854
Bacillota
TGA
Ser
>WENV181618618
OGMC01003220
304022
Bacillota
GCC
Gly
>WENV181618944
OGMC01042506
59312
Bacillota
CAG
Leu
>WENV181618910
OGMC01029214
338147
Bacillota
CTC
Glu
>WENV181618781
OGMC01010778
155273
Bacillota
CAT
Met
>WENV181618833
OGMC01017520
429429
Bacillota
CCA
Trp
>WENV181618907
OGMC01028260
313454
Bacillota
GAA
Phe
>WENV181618407
OGMC01000244
11034
Bacillota
GGA
Ser
>WENV181618661
OGMC01004089
156937
Bacillota
GTG
His
>WENV181618617
OGMC01003220
235079
Bacillota
GAA
Phe
>WENV181618854
OGMC01020468
173314
Bacillota
GAT
Ile
>WENV181618875
OGMC01024194
316443
Bacillota
GTC
Asp
>WENV181618566
OGMC01001988
338149
Bacillota
CTC
Glu
>WENV181618654
OGMC01003983
245298
Bacillota
CGG
Pro
>WENV181618874
OGMC01023771
37269
Bacillota
TGA
Ser
>WENV181618315
OGMC01000038
287000
Bacillota
GTT
Asn
>WENV181618316
OGMC01000038
287000
Bacillota
GTT
Asn
>WENV181618906
OGMC01028260
169968
Bacillota
CAT
Met
>WENV181618614
OGMC01003129
152149
Bacillota
GTG
His
>WENV181618653
OGMC01003983
411547
Bacillota
CTG
Gln
>WENV181618424
OGMC01000416
411547
Bacillota
CTG
Gln
>WENV181618471
OGMC01000897
4624
Bacillota
GCT
Ser
>WENV181618632
OGMC01003526
235095
Bacillota
GGT
Thr
>WENV181618431
OGMC01000493
411549
Bacillota
TTG
Gln
>WENV181618802
OGMC01013563
148188
Bacillota
CCG
Arg
>WENV181618895
OGMC01026445
243401
Bacillota
CGT
Thr
>WENV181618518
OGMC01001332
163943
Bacillota
GTC
Asp
>WENV181618877
OGMC01024194
113225
Bacillota
TAG
Leu
>WENV181618768
OGMC01010068
144583
Bacillota
ACG
Arg
>WENV181618729
OGMC01006943
247734
Bacillota
TGC
Ala
>WENV181618565
OGMC01001928
144621
Bacillota
GTT
Asn
>WENV181618567
OGMC01001988
144621
Bacillota
GTT
Asn
>WENV181618421
OGMC01000377
58712
Bacillota
CAG
Leu
>WENV181618438
OGMC01000536
245296
Bacillota
CCC
Gly
>WENV181618774
OGMC01010386
299139
Bacillota
TGC
Ala
>WENV181618853
OGMC01020468
299139
Bacillota
TGC
Ala
>WENV181618561
OGMC01001911
144594
Bacillota
CAC
Val
>WENV181618399
OGMC01000195
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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