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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
69 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181709728
OGPN01003313
24650
Bacillota
TAA
Leu
>WENV181710088
OGPN01017394
352996
Bacillota
TTC
Glu
>WENV181709868
OGPN01007464
144612
Bacillota
TCT
Arg
>WENV181709899
OGPN01008194
144612
Bacillota
TCT
Arg
>WENV181709568
OGPN01001383
267649
Bacillota
TAC
Val
>WENV181709497
OGPN01000901
235134
Bacillota
GAA
Phe
>WENV181709984
OGPN01011455
235098
Bacillota
GAC
Val
>WENV181710016
OGPN01013971
338152
Bacillota
TTC
Glu
>WENV181709692
OGPN01002637
44854
Bacillota
TGA
Ser
>WENV181709936
OGPN01009755
44854
Bacillota
TGA
Ser
>WENV181709543
OGPN01001276
304022
Bacillota
GCC
Gly
>WENV181710194
OGPN01030861
307003
Bacillota
TGC
Ala
>WENV181709738
OGPN01003447
238910
Bacillota
CTT
Lys
>WENV181709871
OGPN01007469
338147
Bacillota
CTC
Glu
>WENV181710280
OGPN01047894
235150
Bacillota
TGC
Ala
>WENV181709387
OGPN01000301
340802
Bacillota
TTG
Gln
>WENV181709651
OGPN01002073
293599
Bacillota
CTT
Lys
>WENV181710168
OGPN01026451
388249
Bacillota
GCA
Cys
>WENV181709478
OGPN01000834
429429
Bacillota
CCA
Trp
>WENV181709623
OGPN01001858
11034
Bacillota
GGA
Ser
>WENV181709361
OGPN01000217
274189
Bacillota
TGT
Thr
>WENV181710162
OGPN01025195
274189
Bacillota
TGT
Thr
>WENV181709542
OGPN01001276
235079
Bacillota
GAA
Phe
>WENV181710071
OGPN01016368
173314
Bacillota
GAT
Ile
>WENV181709620
OGPN01001836
338149
Bacillota
CTC
Glu
>WENV181710024
OGPN01014204
245298
Bacillota
CGG
Pro
>WENV181709391
OGPN01000332
37269
Bacillota
TGA
Ser
>WENV181709976
OGPN01011179
37269
Bacillota
TGA
Ser
>WENV181709580
OGPN01001480
287000
Bacillota
GTT
Asn
>WENV181710012
OGPN01013641
169968
Bacillota
CAT
Met
>WENV181710022
OGPN01014202
201704
Bacillota
GAT
Ile
>WENV181709422
OGPN01000510
152492
Bacillota
GGG
Pro
>WENV181709749
OGPN01003655
152492
Bacillota
GGG
Pro
>WENV181709897
OGPN01008162
152492
Bacillota
GGG
Pro
>WENV181709996
OGPN01012250
100326
Bacillota
GTA
Tyr
>WENV181709386
OGPN01000301
144610
Bacillota
GTG
His
>WENV181709270
OGPN01000035
240017
Bacillota
GCC
Gly
>WENV181709631
OGPN01001901
411547
Bacillota
CTG
Gln
>WENV181709950
OGPN01010209
411547
Bacillota
CTG
Gln
>WENV181710023
OGPN01014204
411547
Bacillota
CTG
Gln
>WENV181709811
OGPN01005305
147684
Bacillota
ACG
Arg
>WENV181709693
OGPN01002637
4624
Bacillota
GCT
Ser
>WENV181709937
OGPN01009755
4624
Bacillota
GCT
Ser
>WENV181710322
OGPN01058655
411584
Bacillota
TCC
Gly
>WENV181710136
OGPN01022485
411549
Bacillota
TTG
Gln
>WENV181709942
OGPN01009865
245386
Bacillota
CCA
Trp
>WENV181710219
OGPN01035123
98231
Bacillota
GAG
Leu
>WENV181710083
OGPN01017322
148188
Bacillota
CCG
Arg
>WENV181709756
OGPN01003799
80612
Bacillota
GTA
Tyr
>WENV181710007
OGPN01013512
80612
Bacillota
GTA
Tyr
>WENV181709886
OGPN01007849
163943
Bacillota
GTC
Asp
>WENV181709762
OGPN01003938
235124
Bacillota
TGG
Pro
>WENV181709935
OGPN01009734
235124
Bacillota
TGG
Pro
>WENV181709978
OGPN01011195
338129
Bacillota
TGT
Thr
>WENV181710349
OGPN01066396
144583
Bacillota
ACG
Arg
>WENV181709734
OGPN01003411
144652
Bacillota
GTC
Asp
>WENV181710038
OGPN01014632
247734
Bacillota
TGC
Ala
>WENV181709621
OGPN01001836
144621
Bacillota
GTT
Asn
>WENV181709834
OGPN01006365
58712
Bacillota
CAG
Leu
>WENV181709870
OGPN01007464
58712
Bacillota
CAG
Leu
>WENV181709826
OGPN01005896
245296
Bacillota
CCC
Gly
>WENV181709506
OGPN01001010
272992
Bacillota
CTT
Lys
>WENV181709385
OGPN01000301
157635
Bacillota
TCT
Arg
>WENV181709590
OGPN01001539
144594
Bacillota
CAC
Val
>WENV181709883
OGPN01007785
144594
Bacillota
CAC
Val
>WENV181710279
OGPN01047799
95563
Bacillota
GTA
Tyr
>WENV181709647
OGPN01002029
272488
Bacillota
GAA
Phe
>WENV181709760
OGPN01003898
272488
Bacillota
GAA
Phe
>WENV181709612
OGPN01001720
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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