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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181722404
OGPV01059118
235146
Actinomycetota
CGT
Thr
>WENV181721891
OGPV01012334
119475
Actinomycetota
TAA
Leu
>WENV181722218
OGPV01033189
235347
Actinomycetota
GGC
Ala
>WENV181721807
OGPV01009808
235153
Actinomycetota
CCT
Arg
>WENV181721354
OGPV01001398
144589
Actinomycetota
ACG
Arg
>WENV181721355
OGPV01001398
144589
Actinomycetota
ACG
Arg
>WENV181722412
OGPV01061097
16400
Actinomycetota
GAG
Leu
>WENV181722011
OGPV01018296
37070
Actinomycetota
CGA
Ser
>WENV181722047
OGPV01019733
235092
Actinomycetota
CCG
Arg
>WENV181721814
OGPV01010186
245301
Actinomycetota
GCC
Gly
>WENV181721816
OGPV01010186
245301
Actinomycetota
GCC
Gly
>WENV181721817
OGPV01010186
245301
Actinomycetota
GCC
Gly
>WENV181722372
OGPV01052110
23370
Actinomycetota
GCT
Ser
>WENV181721959
OGPV01015647
338239
Actinomycetota
TTC
Glu
>WENV181722286
OGPV01042240
16219
Actinomycetota
GCT
Ser
>WENV181721733
OGPV01006670
235174
Actinomycetota
TGC
Ala
>WENV181722007
OGPV01017866
235101
Actinomycetota
TTT
Lys
>WENV181722149
OGPV01027080
235101
Actinomycetota
TTT
Lys
>WENV181722538
OGPV01092421
153948
Actinomycetota
GGG
Pro
>WENV181721499
OGPV01002461
145345
Actinomycetota
TAC
Val
>WENV181721985
OGPV01017039
145345
Actinomycetota
TAC
Val
>WENV181721861
OGPV01011450
413665
Actinomycetota
TTG
Gln
>WENV181722168
OGPV01028918
16223
Actinomycetota
GAG
Leu
>WENV181721876
OGPV01011769
382278
Actinomycetota
GAC
Val
>WENV181721663
OGPV01004804
144593
Actinomycetota
TAT
Ile
>WENV181721778
OGPV01008621
144636
Actinomycetota
GAT
Ile
>WENV181722023
OGPV01018758
45147
Actinomycetota
CGA
Ser
>WENV181722447
OGPV01067084
98279
Actinomycetota
GTA
Tyr
>WENV181722247
OGPV01036287
338148
Actinomycetota
CTG
Gln
>WENV181721519
OGPV01002673
235148
Actinomycetota
GTT
Asn
>WENV181722300
OGPV01043229
237792
Actinomycetota
CCT
Arg
>WENV181722445
OGPV01066800
113702
Actinomycetota
TAA
Leu
>WENV181721661
OGPV01004795
176456
Actinomycetota
TCT
Arg
>WENV181721961
OGPV01015763
338139
Actinomycetota
GTT
Asn
>WENV181721962
OGPV01015763
338139
Actinomycetota
GTT
Asn
>WENV181722397
OGPV01057831
235348
Actinomycetota
CCT
Arg
>WENV181722163
OGPV01028484
37521
Actinomycetota
GCT
Ser
>WENV181721994
OGPV01017273
237794
Actinomycetota
CCG
Arg
>WENV181721721
OGPV01006467
411554
Actinomycetota
CCC
Gly
>WENV181722004
OGPV01017742
411554
Actinomycetota
CCC
Gly
>WENV181721795
OGPV01009555
113601
Actinomycetota
TAG
Leu
>WENV181721979
OGPV01016713
144595
Actinomycetota
CAA
Leu
>WENV181722012
OGPV01018387
144595
Actinomycetota
CAA
Leu
>WENV181721720
OGPV01006461
145343
Actinomycetota
GGG
Pro
>WENV181721625
OGPV01004018
235149
Actinomycetota
CCT
Arg
>WENV181722238
OGPV01035546
51286
Actinomycetota
TGA
Ser
>WENV181721643
OGPV01004528
240009
Actinomycetota
GGC
Ala
>WENV181721608
OGPV01003638
414234
Actinomycetota
CTG
Gln
>WENV181721794
OGPV01009555
235121
Actinomycetota
CGT
Thr
>WENV181721597
OGPV01003468
144635
Actinomycetota
TGG
Pro
>WENV181722281
OGPV01041635
119485
Actinomycetota
TAA
Leu
>WENV181721726
OGPV01006551
80622
Actinomycetota
CAG
Leu
>WENV181722171
OGPV01028966
44851
Actinomycetota
TGA
Ser
>WENV181722419
OGPV01062381
158513
Actinomycetota
TGG
Pro
>WENV181721815
OGPV01010186
412834
Actinomycetota
GCA
Cys
>WENV181721734
OGPV01006670
235173
Actinomycetota
GGC
Ala
>WENV181722018
OGPV01018658
278447
Actinomycetota
GTG
His
>WENV181722164
OGPV01028484
411599
Actinomycetota
TTG
Gln
>WENV181722518
OGPV01083325
95593
Actinomycetota
>WENV181722183
OGPV01030812
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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