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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181732349
OGQD01026122
235146
Actinomycetota
CGT
Thr
>WENV181731359
OGQD01000494
119475
Actinomycetota
TAA
Leu
>WENV181731481
OGQD01001061
235153
Actinomycetota
CCT
Arg
>WENV181732202
OGQD01015879
235153
Actinomycetota
CCT
Arg
>WENV181731613
OGQD01001765
144589
Actinomycetota
ACG
Arg
>WENV181731614
OGQD01001765
144589
Actinomycetota
ACG
Arg
>WENV181731317
OGQD01000376
37070
Actinomycetota
CGA
Ser
>WENV181731557
OGQD01001405
235092
Actinomycetota
CCG
Arg
>WENV181732427
OGQD01034696
245301
Actinomycetota
GCC
Gly
>WENV181732292
OGQD01022392
411601
Actinomycetota
CCC
Gly
>WENV181732166
OGQD01013788
241401
Actinomycetota
CCA
Trp
>WENV181731486
OGQD01001073
16219
Actinomycetota
GCT
Ser
>WENV181732185
OGQD01014681
44929
Actinomycetota
GGA
Ser
>WENV181731371
OGQD01000529
235174
Actinomycetota
TGC
Ala
>WENV181731768
OGQD01003299
235101
Actinomycetota
TTT
Lys
>WENV181731247
OGQD01000197
144625
Actinomycetota
GTC
Asp
>WENV181732424
OGQD01034595
153948
Actinomycetota
GGG
Pro
>WENV181731627
OGQD01001847
150473
Actinomycetota
CTC
Glu
>WENV181731777
OGQD01003410
150473
Actinomycetota
CTC
Glu
>WENV181732576
OGQD01060964
44855
Actinomycetota
TGA
Ser
>WENV181732455
OGQD01038985
235199
Actinomycetota
CAC
Val
>WENV181732335
OGQD01024994
44862
Actinomycetota
CGA
Ser
>WENV181731424
OGQD01000759
16223
Actinomycetota
GAG
Leu
>WENV181731447
OGQD01000922
144593
Actinomycetota
TAT
Ile
>WENV181731730
OGQD01002744
238473
Actinomycetota
GTG
His
>WENV181731826
OGQD01004086
144636
Actinomycetota
GAT
Ile
>WENV181731431
OGQD01000796
338148
Actinomycetota
CTG
Gln
>WENV181731390
OGQD01000591
235148
Actinomycetota
GTT
Asn
>WENV181731703
OGQD01002513
235148
Actinomycetota
GTT
Asn
>WENV181731704
OGQD01002513
235148
Actinomycetota
GTT
Asn
>WENV181732551
OGQD01051296
144825
Actinomycetota
CAT
Met
>WENV181731420
OGQD01000739
151943
Actinomycetota
>WENV181732538
OGQD01048245
338139
Actinomycetota
GTT
Asn
>WENV181732367
OGQD01028034
235348
Actinomycetota
CCT
Arg
>WENV181731471
OGQD01001008
411554
Actinomycetota
CCC
Gly
>WENV181731491
OGQD01001077
113601
Actinomycetota
TAG
Leu
>WENV181731286
OGQD01000288
144595
Actinomycetota
CAA
Leu
>WENV181731535
OGQD01001309
145343
Actinomycetota
GGG
Pro
>WENV181731803
OGQD01003763
235149
Actinomycetota
CCT
Arg
>WENV181731117
OGQD01000043
240009
Actinomycetota
GGC
Ala
>WENV181732440
OGQD01036563
153915
Actinomycetota
ACG
Arg
>WENV181732441
OGQD01036563
153915
Actinomycetota
ACG
Arg
>WENV181731490
OGQD01001077
235121
Actinomycetota
CGT
Thr
>WENV181731287
OGQD01000288
144635
Actinomycetota
TGG
Pro
>WENV181731562
OGQD01001439
80622
Actinomycetota
CAG
Leu
>WENV181731620
OGQD01001806
44851
Actinomycetota
TGA
Ser
>WENV181731323
OGQD01000389
412834
Actinomycetota
GCA
Cys
>WENV181731372
OGQD01000529
235173
Actinomycetota
GGC
Ala
>WENV181731402
OGQD01000671
235173
Actinomycetota
GGC
Ala
>WENV181732319
OGQD01023924
144660
Actinomycetota
TAC
Val
>WENV181731578
OGQD01001548
95593
Actinomycetota
>WENV181731939
OGQD01006420
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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