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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181778138
OGRH01017418
196621
Bacillota
GTC
Asp
>WENV181778191
OGRH01020043
158247
Bacillota
>WENV181778010
OGRH01010204
144612
Bacillota
TCT
Arg
>WENV181777500
OGRH01000540
267649
Bacillota
TAC
Val
>WENV181778060
OGRH01013041
235098
Bacillota
GAC
Val
>WENV181778214
OGRH01021938
338152
Bacillota
TTC
Glu
>WENV181778156
OGRH01018185
118788
Bacillota
TAG
Leu
>WENV181778192
OGRH01020103
44854
Bacillota
TGA
Ser
>WENV181778443
OGRH01068199
235154
Bacillota
GTT
Asn
>WENV181778276
OGRH01029158
144577
Bacillota
GAT
Ile
>WENV181778085
OGRH01014182
307003
Bacillota
TGC
Ala
>WENV181777459
OGRH01000386
59312
Bacillota
CAG
Leu
>WENV181778370
OGRH01041837
238910
Bacillota
CTT
Lys
>WENV181777329
OGRH01000091
338147
Bacillota
CTC
Glu
>WENV181777461
OGRH01000401
338147
Bacillota
CTC
Glu
>WENV181777462
OGRH01000401
338147
Bacillota
CTC
Glu
>WENV181777662
OGRH01001377
338147
Bacillota
CTC
Glu
>WENV181778357
OGRH01039478
235150
Bacillota
TGC
Ala
>WENV181777447
OGRH01000350
235114
Bacillota
TTT
Lys
>WENV181777584
OGRH01000878
429429
Bacillota
CCA
Trp
>WENV181777940
OGRH01006633
313454
Bacillota
GAA
Phe
>WENV181777617
OGRH01001025
41154
Bacillota
TAA
Leu
>WENV181777457
OGRH01000386
44859
Bacillota
AAG
Leu
>WENV181777458
OGRH01000386
44859
Bacillota
AAG
Leu
>WENV181778196
OGRH01020199
16834
Bacillota
GCT
Ser
>WENV181778304
OGRH01032281
11034
Bacillota
GGA
Ser
>WENV181778151
OGRH01018185
444721
Bacillota
TCC
Gly
>WENV181778275
OGRH01029158
235087
Bacillota
TGC
Ala
>WENV181778178
OGRH01018772
173314
Bacillota
GAT
Ile
>WENV181778250
OGRH01026033
316443
Bacillota
GTC
Asp
>WENV181777849
OGRH01004140
338149
Bacillota
CTC
Glu
>WENV181777836
OGRH01003839
271471
Bacillota
GCC
Gly
>WENV181778162
OGRH01018185
144766
Bacillota
CAT
Met
>WENV181778091
OGRH01014238
245298
Bacillota
CGG
Pro
>WENV181778213
OGRH01021938
287000
Bacillota
GTT
Asn
>WENV181778345
OGRH01036749
162445
Bacillota
CAT
Met
>WENV181777397
OGRH01000219
152492
Bacillota
GGG
Pro
>WENV181778217
OGRH01022478
152492
Bacillota
GGG
Pro
>WENV181777718
OGRH01001965
144610
Bacillota
GTG
His
>WENV181778090
OGRH01014238
411547
Bacillota
CTG
Gln
>WENV181777841
OGRH01003977
147684
Bacillota
ACG
Arg
>WENV181778193
OGRH01020103
4624
Bacillota
GCT
Ser
>WENV181777928
OGRH01006082
412387
Bacillota
GCA
Cys
>WENV181778427
OGRH01059955
411584
Bacillota
TCC
Gly
>WENV181777982
OGRH01008597
235095
Bacillota
GGT
Thr
>WENV181778139
OGRH01017418
235095
Bacillota
GGT
Thr
>WENV181778021
OGRH01010919
250349
Bacillota
GAA
Phe
>WENV181777610
OGRH01000991
419639
Bacillota
GCA
Cys
>WENV181778397
OGRH01050050
411549
Bacillota
TTG
Gln
>WENV181777411
OGRH01000271
235142
Bacillota
CTT
Lys
>WENV181777524
OGRH01000623
235142
Bacillota
CTT
Lys
>WENV181778110
OGRH01015502
16411
Bacillota
GCT
Ser
>WENV181777604
OGRH01000964
148188
Bacillota
CCG
Arg
>WENV181778258
OGRH01026035
148188
Bacillota
CCG
Arg
>WENV181778272
OGRH01028224
80612
Bacillota
GTA
Tyr
>WENV181778020
OGRH01010919
235197
Bacillota
GTC
Asp
>WENV181778252
OGRH01026033
113225
Bacillota
TAG
Leu
>WENV181778118
OGRH01016099
298620
Bacillota
CAT
Met
>WENV181778019
OGRH01010864
235124
Bacillota
TGG
Pro
>WENV181778164
OGRH01018185
163753
Bacillota
TGG
Pro
>WENV181778233
OGRH01024932
345314
Bacillota
TTG
Gln
>WENV181778399
OGRH01050403
201667
Bacillota
TCT
Arg
>WENV181778271
OGRH01028224
338129
Bacillota
TGT
Thr
>WENV181777686
OGRH01001570
144583
Bacillota
ACG
Arg
>WENV181778137
OGRH01017418
235171
Bacillota
CCA
Trp
>WENV181777850
OGRH01004140
144621
Bacillota
GTT
Asn
>WENV181777446
OGRH01000350
235113
Bacillota
GAA
Phe
>WENV181778207
OGRH01021031
353527
Bacillota
TTC
Glu
>WENV181778012
OGRH01010204
58712
Bacillota
CAG
Leu
>WENV181778157
OGRH01018185
144762
Bacillota
TCT
Arg
>WENV181778072
OGRH01013629
245296
Bacillota
CCC
Gly
>WENV181777926
OGRH01006005
272992
Bacillota
CTT
Lys
>WENV181777826
OGRH01003739
152497
Bacillota
GTC
Asp
>WENV181777532
OGRH01000631
343021
Bacillota
CAT
Met
>WENV181777476
OGRH01000433
144594
Bacillota
CAC
Val
>WENV181777544
OGRH01000691
95563
Bacillota
GTA
Tyr
>WENV181778036
OGRH01011584
414486
Bacillota
CCC
Gly
>WENV181777640
OGRH01001232
152018
Bacillota
CCT
Arg
>WENV181777870
OGRH01004648
114075
Bacillota
TAG
Leu
>WENV181778065
OGRH01013427
146770
Bacillota
TTC
Glu
>WENV181777695
OGRH01001662
413179
Bacillota
CCC
Gly
>WENV181778150
OGRH01018185
338207
Bacillota
TTC
Glu
>WENV181778205
OGRH01020883
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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