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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
97 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181793705
OGRR01008417
235146
Actinomycetota
CGT
Thr
>WENV181793365
OGRR01001745
119475
Actinomycetota
TAA
Leu
>WENV181793680
OGRR01007759
235347
Actinomycetota
GGC
Ala
>WENV181793078
OGRR01000408
144589
Actinomycetota
ACG
Arg
>WENV181793079
OGRR01000408
144589
Actinomycetota
ACG
Arg
>WENV181793141
OGRR01000590
144589
Actinomycetota
ACG
Arg
>WENV181793142
OGRR01000590
144589
Actinomycetota
ACG
Arg
>WENV181793995
OGRR01034750
16400
Actinomycetota
GAG
Leu
>WENV181793496
OGRR01003492
37070
Actinomycetota
CGA
Ser
>WENV181793654
OGRR01007074
37070
Actinomycetota
CGA
Ser
>WENV181793143
OGRR01000595
201717
Actinomycetota
CTT
Lys
>WENV181793485
OGRR01003334
201717
Actinomycetota
CTT
Lys
>WENV181793460
OGRR01002888
235194
Actinomycetota
GTG
His
>WENV181793822
OGRR01014592
273786
Actinomycetota
CGT
Thr
>WENV181793737
OGRR01010477
158720
Actinomycetota
ACG
Arg
>WENV181793765
OGRR01012200
158720
Actinomycetota
ACG
Arg
>WENV181793766
OGRR01012200
158720
Actinomycetota
ACG
Arg
>WENV181793707
OGRR01008517
411601
Actinomycetota
CCC
Gly
>WENV181793218
OGRR01000955
144826
Actinomycetota
GGG
Pro
>WENV181793195
OGRR01000785
23370
Actinomycetota
GCT
Ser
>WENV181793738
OGRR01010477
147146
Actinomycetota
ACG
Arg
>WENV181793551
OGRR01004892
174149
Actinomycetota
GAT
Ile
>WENV181793324
OGRR01001510
338239
Actinomycetota
TTC
Glu
>WENV181793461
OGRR01002893
16219
Actinomycetota
GCT
Ser
>WENV181793468
OGRR01002998
16219
Actinomycetota
GCT
Ser
>WENV181793396
OGRR01002070
235174
Actinomycetota
TGC
Ala
>WENV181793456
OGRR01002826
235174
Actinomycetota
TGC
Ala
>WENV181793552
OGRR01004892
235174
Actinomycetota
TGC
Ala
>WENV181793788
OGRR01013095
235174
Actinomycetota
TGC
Ala
>WENV181792852
OGRR01000079
235101
Actinomycetota
TTT
Lys
>WENV181793287
OGRR01001246
235101
Actinomycetota
TTT
Lys
>WENV181793242
OGRR01001088
121510
Actinomycetota
TAA
Leu
>WENV181793610
OGRR01005759
356045
Actinomycetota
GAC
Val
>WENV181793516
OGRR01004101
44855
Actinomycetota
TGA
Ser
>WENV181793729
OGRR01010110
145345
Actinomycetota
TAC
Val
>WENV181793611
OGRR01005759
235199
Actinomycetota
CAC
Val
>WENV181793814
OGRR01014223
44862
Actinomycetota
CGA
Ser
>WENV181793005
OGRR01000243
198659
Actinomycetota
TAC
Val
>WENV181793377
OGRR01001869
198659
Actinomycetota
TAC
Val
>WENV181793679
OGRR01007759
413665
Actinomycetota
TTG
Gln
>WENV181793453
OGRR01002819
254857
Actinomycetota
CCG
Arg
>WENV181793361
OGRR01001692
254857
Actinomycetota
CCG
Arg
>WENV181793370
OGRR01001804
16223
Actinomycetota
GAG
Leu
>WENV181793191
OGRR01000771
144593
Actinomycetota
TAT
Ile
>WENV181793924
OGRR01023452
113703
Actinomycetota
TAG
Leu
>WENV181793194
OGRR01000785
144700
Actinomycetota
CAT
Met
>WENV181792856
OGRR01000091
44942
Actinomycetota
TGA
Ser
>WENV181793662
OGRR01007513
243671
Actinomycetota
CTC
Glu
>WENV181793442
OGRR01002605
45147
Actinomycetota
CGA
Ser
>WENV181793174
OGRR01000702
338148
Actinomycetota
CTG
Gln
>WENV181793343
OGRR01001616
338148
Actinomycetota
CTG
Gln
>WENV181793663
OGRR01007513
338148
Actinomycetota
CTG
Gln
>WENV181793432
OGRR01002464
235148
Actinomycetota
GTT
Asn
>WENV181793319
OGRR01001492
53078
Actinomycetota
GGA
Ser
>WENV181793589
OGRR01005313
53078
Actinomycetota
GGA
Ser
>WENV181794006
OGRR01036640
237792
Actinomycetota
CCT
Arg
>WENV181793838
OGRR01015375
113702
Actinomycetota
TAA
Leu
>WENV181793160
OGRR01000647
176456
Actinomycetota
TCT
Arg
>WENV181793631
OGRR01006274
144825
Actinomycetota
CAT
Met
>WENV181793167
OGRR01000671
145347
Actinomycetota
CAA
Leu
>WENV181793290
OGRR01001284
235348
Actinomycetota
CCT
Arg
>WENV181793517
OGRR01004109
237794
Actinomycetota
CCG
Arg
>WENV181793369
OGRR01001800
411554
Actinomycetota
CCC
Gly
>WENV181793575
OGRR01005217
411554
Actinomycetota
CCC
Gly
>WENV181793823
OGRR01014592
113601
Actinomycetota
TAG
Leu
>WENV181793373
OGRR01001827
144595
Actinomycetota
CAA
Leu
>WENV181793719
OGRR01009095
144595
Actinomycetota
CAA
Leu
>WENV181793819
OGRR01014501
144595
Actinomycetota
CAA
Leu
>WENV181792988
OGRR01000222
145343
Actinomycetota
GGG
Pro
>WENV181793384
OGRR01001959
145343
Actinomycetota
GGG
Pro
>WENV181793136
OGRR01000578
235149
Actinomycetota
CCT
Arg
>WENV181793211
OGRR01000919
235149
Actinomycetota
CCT
Arg
>WENV181793752
OGRR01011377
51286
Actinomycetota
TGA
Ser
>WENV181793846
OGRR01015922
240009
Actinomycetota
GGC
Ala
>WENV181793867
OGRR01017456
163764
Actinomycetota
TGG
Pro
>WENV181793113
OGRR01000491
145269
Actinomycetota
CAT
Met
>WENV181793593
OGRR01005367
235121
Actinomycetota
CGT
Thr
>WENV181793168
OGRR01000671
144635
Actinomycetota
TGG
Pro
>WENV181793181
OGRR01000719
119485
Actinomycetota
TAA
Leu
>WENV181793170
OGRR01000693
80622
Actinomycetota
CAG
Leu
>WENV181793695
OGRR01008085
80622
Actinomycetota
CAG
Leu
>WENV181793709
OGRR01008675
44851
Actinomycetota
TGA
Ser
>WENV181793145
OGRR01000609
16222
Actinomycetota
GAG
Leu
>WENV181793959
OGRR01026357
163948
Actinomycetota
CAT
Met
>WENV181793706
OGRR01008433
412834
Actinomycetota
GCA
Cys
>WENV181793298
OGRR01001329
235173
Actinomycetota
GGC
Ala
>WENV181793397
OGRR01002070
235173
Actinomycetota
GGC
Ala
>WENV181793457
OGRR01002826
235173
Actinomycetota
GGC
Ala
>WENV181793538
OGRR01004587
235173
Actinomycetota
GGC
Ala
>WENV181793816
OGRR01014339
235173
Actinomycetota
GGC
Ala
>WENV181793530
OGRR01004336
243162
Actinomycetota
GTT
Asn
>WENV181793444
OGRR01002703
144660
Actinomycetota
TAC
Val
>WENV181793480
OGRR01003248
278447
Actinomycetota
GTG
His
>WENV181793685
OGRR01007874
278447
Actinomycetota
GTG
His
>WENV181793675
OGRR01007689
267574
Actinomycetota
CAC
Val
>WENV181793193
OGRR01000785
95593
Actinomycetota
>WENV181793595
OGRR01005509
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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